| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_4107 |
|---|
| Symbol | |
|---|
| ID | 6982879 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011369 |
|---|
| Strand | - |
|---|
| Start bp | 4288338 |
|---|
| End bp | 4289411 |
|---|
| Gene Length | 1074 bp |
|---|
| Protein Length | 357 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 643398837 |
|---|
| Product | spermidine/putrescine ABC transporter ATPase subunit |
|---|
| Protein accession | YP_002283595 |
|---|
| Protein GI | 209551678 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
|---|
| TIGRFAM ID | [TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGCGC CGCGCATACG CTTTGAAAGA ATCTCCAAAT CCTTTGGCCT GCACCAAGTC
GTCAAAGACC TGTCGCTCGA CATCGAGAGG GGCGAGTTCG TCAGCCTTCT GGGACCTTCG
GGTTCAGGCA AGACGACTTT GCTGATGATG CTGGCGGGTT TCGAAAACCC GACCGCCGGC
GGCATTTTTC TCGACGGCCG CCGCATCGAC CATCTGCCTC CGCATCGGCG CGAGATGGGC
GTCGTCTTCC AGAATTATGC GCTCTTTCCG CATATGTCGA TCGCCGACAA CATCGCCTTT
CCTCTCAGGA TGCGCGGTGT CGGTCGCAGC GAGATCGAAG AGCGTGTGAA ACGCGCCCTT
GAGATGGTGC AGCTGTCGGC CATGAGCGGA CGCAAGCCCG CCCAGCTTTC GGGCGGACAG
CAGCAGCGCG TGGCGCTTGC CCGTTCCCTG GTGTTCGAGC CAGCGGTGGT GCTGATGGAC
GAGCCGCTTG GGGCACTGGA CAAACAGTTG CGCGAACAGA TGCAACTCGA CATCCGCGCC
CTTCACAAGC GGCTGGAACT GACCGTGGTA TTCGTGACCC ATGATCAATC CGAGGCGCTG
ACCATGTCGG ACCGGATTGC GGTCTTCAAC CGCGGCAACA TCGAGCAGAT CGGTACGCCG
CGCGATATCT ACGACCGGCC GCAGACACGC GCCGTCGCCG AATTCATCGG CGAAACCAAT
CTGATAGAAG GAACGGTCAA GGCGACGGGC ACGACCGGCA CCTCGGTCGA GATCGCCGAC
GGACGGCATG TGATCGTGCC TGGCAGTAAT TCCCTCGCCG TCGGCAGCCG CGTCCATATT
TCCGTTCGCC CCGAGCGCAT TTCTCTGGCG GCCGGCAGCA TCGGCGCGGC GGCGAACGCC
CTGCCGGCAA AAATACTCGA TAGCGTCTAT CAGGGCGACC ATTTGCGGGT GCAGCTCGAC
GAGGATGCCT TCCGCTTCGT GGTCCGGACC GACATGCGGT CGGCGGAGTG GCCGGTCGGA
GCCGATGTGG TGGCGCACTT CACGCCTGAA GACTGCTGGG TGATTGCAGC ATGA
|
|---|
| Protein sequence | MAAPRIRFER ISKSFGLHQV VKDLSLDIER GEFVSLLGPS GSGKTTLLMM LAGFENPTAG
GIFLDGRRID HLPPHRREMG VVFQNYALFP HMSIADNIAF PLRMRGVGRS EIEERVKRAL
EMVQLSAMSG RKPAQLSGGQ QQRVALARSL VFEPAVVLMD EPLGALDKQL REQMQLDIRA
LHKRLELTVV FVTHDQSEAL TMSDRIAVFN RGNIEQIGTP RDIYDRPQTR AVAEFIGETN
LIEGTVKATG TTGTSVEIAD GRHVIVPGSN SLAVGSRVHI SVRPERISLA AGSIGAAANA
LPAKILDSVY QGDHLRVQLD EDAFRFVVRT DMRSAEWPVG ADVVAHFTPE DCWVIAA
|
|---|
| |