Gene Rleg2_3949 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_3949 
Symbol 
ID6982713 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011369 
Strand
Start bp4097782 
End bp4098624 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content60% 
IMG OID643398672 
Product5-carboxymethyl-2-hydroxymuconate Delta-isomerase 
Protein accessionYP_002283437 
Protein GI209551520 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.242599 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCTGA TGCGTGTTGG CCAAGCAGGC AATGAAAAAC CCGCGCTTCT CGACGTCGAT 
GGCAAGATCC GCGATCTCTC CGGTCATGTG GCCGATATCG GCGGCGAGGT GATCACGCCG
GCCGGTCTTG CAAAGATAGC GGCGATCGAT CCGAAGAGCC TTCCGGAACT TATGCCCGGC
CGTATCGGCG CCTGCGTCGC CGGCACTGGC AAATTCATCT GCATCGGCTT GAATTATTCG
GATCATGCTG CCGAAACCGG CGCCACCGTT CCGCCCGAGC CGATCATCTT CATGAAAGCA
ACATCGGCAA TTGTCGGCCC GAACGACGAT GTCATCATCC CCCGCGGTTC GGAAAAGACC
GATTGGGAAG TCGAACTCGG CGTCGTCATC GGCAAGACTG CCAAATATGT AACGGAAGCC
GAAGCGCTGG ACTATGTCGC CGGTTATTGC GTCTCCAACG ATGTCTCCGA GCGCGCTTTC
CAGACCGAGC GGTCCGGGCA ATGGACGAAG GGCAAGTCCT GCGACACTTT TGGCCCGATC
GGCCCATGGC TCGTGACCAA GGACGAAATT CCCGAACCGC AGAACCTTGG CATGTGGCTG
ACGGTCAACG GCCAGAAGAT GCAGAACGGC TCGTCGAAGA CGATGGTTTA CGGCGTGGCT
TTCCTGGTCT CCTACCTCAG CCAGTTCATG TCGCTGCATC CCGGCGACGT GATCTCGACC
GGCACGCCTC CGGGCGTCGG CATGGGCCTC AAGCCGCCGC GTTATCTCAA GGCTGGCGAC
GTGGTCGAAC TCGGCATCGA AGGTCTCGGC ACCCAGAAGC AGACCTTCGT AGCGGACCGT
TAA
 
Protein sequence
MKLMRVGQAG NEKPALLDVD GKIRDLSGHV ADIGGEVITP AGLAKIAAID PKSLPELMPG 
RIGACVAGTG KFICIGLNYS DHAAETGATV PPEPIIFMKA TSAIVGPNDD VIIPRGSEKT
DWEVELGVVI GKTAKYVTEA EALDYVAGYC VSNDVSERAF QTERSGQWTK GKSCDTFGPI
GPWLVTKDEI PEPQNLGMWL TVNGQKMQNG SSKTMVYGVA FLVSYLSQFM SLHPGDVIST
GTPPGVGMGL KPPRYLKAGD VVELGIEGLG TQKQTFVADR