| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_3915 |
|---|
| Symbol | purH |
|---|
| ID | 6982679 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011369 |
|---|
| Strand | - |
|---|
| Start bp | 4061273 |
|---|
| End bp | 4062889 |
|---|
| Gene Length | 1617 bp |
|---|
| Protein Length | 538 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 643398638 |
|---|
| Product | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase |
|---|
| Protein accession | YP_002283403 |
|---|
| Protein GI | 209551486 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0138] AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) |
|---|
| TIGRFAM ID | [TIGR00355] phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.230829 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGTTA TTTCCAAGAA GATCCCCGCC CCCGACAAGG TCGAAATCAA GACCGCCCTC
CTCTCCGTCT TCGACAAGAC CGGGATCGTC GAACTCGCCC AGGCACTGTC GGAACAGGGC
GTGCGGCTGC TGTCGACCGG CGGCACCTAC AAGGCGATCG CCGCCGCCGG CCTTGCCGTT
ACCGATGTTT CCGAAATTAC CGGCTTTCCC GAGATCATGG ACGGGCGGGT CAAGACGCTG
CATCCGACGG TGCATGGCGG CCTGCTGGCG ATCCGCGACG ATAGCGAACA CCAGGAGGCG
ATGAAAACCC ACGGCATCGA GGCCATCGAC CTCGCCGTCA TCAACCTCTA TCCCTTCGAA
GACGTGCGCG CCGCCGGCGG CGATTATCCG ACGACCGTCG AAAATATCGA CATCGGCGGC
CCGGCGATGA TCCGCGCTTC GGCCAAGAAC CATGCCTATG TGACGATCCT GACCGATCCG
AACGACTATG CCGAATTCAC CGAGCAGCTT TCCGCGGATG GTGGCAAGAC CGCCTACGCC
TTCCGGCAGC GCATGGCCGC CAAGGCCTAT GCCCGCACCG CGGCCTATGA CGCTGTGATT
TCCAACTGGT TCGCAGAAGC GCTGTCGATC GACACGCCGC GCCACCGCGT TATCGGCGGT
GCGCTGAAGG AAGAGATGCG TTACGGCGAA AATCCGCACC AGAAGGCCGC CTTTTACGTC
ACCGGCGAGA AGCGCCCGGG CGTTTCGACG GCTGCCCTCC TCCAGGGCAA GCAGCTCTCC
TACAACAATA TCAACGATAC CGATGCCGCT TACGAGCTGG TCGCCGAGTT CCTGCCGGAA
AAGGAGCCGG CCTGCGCCAT CATCAAACAT GCCAATCCCT GTGGCGTCGC CACCGGGTCG
AGCCTGGTCG AGGCCTATCG GCGGGCGTTG GCCTGCGACA GCGTTTCCGC CTTCGGCGGC
ATCATTGCAC TCAATCGGAC GCTGGATGCC GAAACGGCTG AGGAGATCGT CAAGCTCTTC
ACCGAAGTGA TCATCGCGCC CGATGTGACC GAGGAGGCGA AGGCGATCAT CGCCCGCAAG
CCGAACCTGC GGCTGCTGTC GGCCGGCGGC CTGCCCGATC CGCGTGCCGC GGGCCTGACG
GCGAAGACCG TTTCCGGCGG CCTGCTGGTC CAGAGCCGCG ACAACGGCAT GGTCGAGGAT
CTGGAGCTCA AGGTCGTCAC CAAGCGCGCG CCGACGGCTC AGGAGCTTGA TGATATGAAG
TTCGCCTTCA AGATCGGCAA ACACGTGAAA TCGAACGCCG TGGTCTATGC CAAGGACGGC
CAGACCGCCG GCATCGGCGC CGGCCAGATG AGCCGGGTCG ATTCTGCCCG TATCGCCGCG
CTGAAGGCGG AAGAAGCCGC CAAGGCGCTC GGCCTTGCCG TGCCGATGAC GCATGGCTCG
GCAGTCGCCT CCGAAGCCTT CCTGCCGTTT GCCGACGGTC TCTTGTCGAT GATCGCAGCG
GGGGCGACGG CGGTGATCCA GCCTGGCGGT TCGATGCGCG ACCAGGAAGT CATCGATGCC
GCCGACGAAC ACGGCATTGC GATGGTCTTT ACCGGCATGC GCCATTTCCG GCACTGA
|
|---|
| Protein sequence | MAVISKKIPA PDKVEIKTAL LSVFDKTGIV ELAQALSEQG VRLLSTGGTY KAIAAAGLAV
TDVSEITGFP EIMDGRVKTL HPTVHGGLLA IRDDSEHQEA MKTHGIEAID LAVINLYPFE
DVRAAGGDYP TTVENIDIGG PAMIRASAKN HAYVTILTDP NDYAEFTEQL SADGGKTAYA
FRQRMAAKAY ARTAAYDAVI SNWFAEALSI DTPRHRVIGG ALKEEMRYGE NPHQKAAFYV
TGEKRPGVST AALLQGKQLS YNNINDTDAA YELVAEFLPE KEPACAIIKH ANPCGVATGS
SLVEAYRRAL ACDSVSAFGG IIALNRTLDA ETAEEIVKLF TEVIIAPDVT EEAKAIIARK
PNLRLLSAGG LPDPRAAGLT AKTVSGGLLV QSRDNGMVED LELKVVTKRA PTAQELDDMK
FAFKIGKHVK SNAVVYAKDG QTAGIGAGQM SRVDSARIAA LKAEEAAKAL GLAVPMTHGS
AVASEAFLPF ADGLLSMIAA GATAVIQPGG SMRDQEVIDA ADEHGIAMVF TGMRHFRH
|
|---|
| |