Gene Rleg2_3909 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_3909 
Symbol 
ID6982673 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011369 
Strand
Start bp4050527 
End bp4051348 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content64% 
IMG OID643398632 
Productlytic murein transglycosylase 
Protein accessionYP_002283397 
Protein GI209551480 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2951] Membrane-bound lytic murein transglycosylase B 
TIGRFAM ID[TIGR02283] lytic murein transglycosylase 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.813736 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.195532 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCATGA CAAAGTTGTT TCTGGCGGCC GCTGCGGCAA TGGGCGTCCT CCATGCGGTA 
CCGGCGTTCG CGCAGGGACC GCAATGCGGC AATACCAGTG CCGGCTTCGA GGCCTGGGTT
GCCGATTTCA AGCAGACGGC GGCAGCCAAT GGCGTCAGCC AGGCCGTGCT CAGCCGCGCC
TTCGCCAACG TCAACTACAA CAAGCCGACG ATCGCCGCCG ACCGCGGCCA GAAGAGCTTC
AAACTCTCCT TCGACGCCTT CATGCAGAAG CGCGGCGGTA CCGCCGTCAT CTCCCGCGGC
CGCAGCATGA AAGCCGCCAA TCAGGCGCTT TTTGCCTCGA TCGAGCGCCG TTTCGGCGTT
CCGGCCGGCC CGCTGATCGC CATCTGGGGC ATGGAGACCG GTTTTGGCAG CTATATGGGC
AACCAGCATA CGCTGTCGGC CGTTTCGACG CTTGCCTATG ACTGCCGCCG TTCGGACTAT
TTCACCGACC AGCTCTATGC CGCGCTCCAG CTCGTCTCCG AGGGTTATCT GAGCCCGCAG
GCCAAGGGTG CTGCCCATGG TGAAATCGGC CAGACACAGT TTCTGCCGCG CAATGTCGTG
CGCTTCGGCG CCGACGGCGA TGGCGACGGC CGCGTCGACA TGGTCGGTTC GCGCGCCGAT
GCACTGGCCT CGACGGCGAA TTTCCTCAAG GGCCATGGCT GGCGCGCCGG CGCCGGCTAT
CAGCCCGGAG AGCCGAATTT CGTCGCCATC CAGGGCTGGA ACGCGGCCAG CGTCTATCAG
CAGTCAATCG CCTATATCGG CCAGCAGATC GACGGCAAAT AG
 
Protein sequence
MRMTKLFLAA AAAMGVLHAV PAFAQGPQCG NTSAGFEAWV ADFKQTAAAN GVSQAVLSRA 
FANVNYNKPT IAADRGQKSF KLSFDAFMQK RGGTAVISRG RSMKAANQAL FASIERRFGV
PAGPLIAIWG METGFGSYMG NQHTLSAVST LAYDCRRSDY FTDQLYAALQ LVSEGYLSPQ
AKGAAHGEIG QTQFLPRNVV RFGADGDGDG RVDMVGSRAD ALASTANFLK GHGWRAGAGY
QPGEPNFVAI QGWNAASVYQ QSIAYIGQQI DGK