| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_3900 |
|---|
| Symbol | |
|---|
| ID | 6982664 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011369 |
|---|
| Strand | + |
|---|
| Start bp | 4040424 |
|---|
| End bp | 4041536 |
|---|
| Gene Length | 1113 bp |
|---|
| Protein Length | 370 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 643398623 |
|---|
| Product | 3-isopropylmalate dehydrogenase |
|---|
| Protein accession | YP_002283388 |
|---|
| Protein GI | 209551471 |
|---|
| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
|---|
| TIGRFAM ID | [TIGR00169] 3-isopropylmalate dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.143543 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.239535 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGTGC GCAATCTTTT CCTGCTGCCG GGTGACGGCA TCGGTCCCGA GGCCATGGGC
GAGGTCCGCA AGATCATCGC CTATATGAAC GAGGCGATGG GCGCCGGTTT CGTCACCGAC
GAAGGCCTTG TCGGTGGCTC CGCCTATGAT GCGCATGGCG CGGCGATCTC CGAAGCCGAC
ATGGTAAAGG CGCTTGCCGC CGATGCCGTT CTCTTCGGCG CCGTCGGCGG TCCGAAATGG
GATAGCGTTC CCTACGAAGT CCGCCCGGAA GCCGGCCTGT TGCGGCTGCG CAAGGACCTG
CAGCTGTTTG CCAACCTGCG CCCCGCCATC TGCTATCCGG CCCTTGCCTC GGCCTCGTCG
CTGAAGCCGG AACTGGTCGA AGGCCTTGAT ATCCTGATCA TCCGCGAGCT GACCGGCGGC
GTCTATTTCG GCGAGCCGAA GGAGATCATC GATCTCGGCA ATGGCCAGAA GCGCGGCATC
GACACCCAGG TCTACGACAC CTACGAGATC GAGCGCATCG CCGGCGTCGC CTTCGAAATG
GCCCGCACCC GGCAGAACCG CGTCTGCTCC ATGGAAAAGC GCAACGTCAT GAAGTCGGGT
GTGCTCTGGA ACCAGGTGGT GACCGAGACG CACAAGGCGA AATATTCCGA CGTCCAGCTC
GAACATATGC TGGCCGATGC CGGCGGCATG CAGCTGGTGC GCCAGCCCAA GCAGTTCGAC
GTCATCGTCA CCGACAATCT CTTCGGCGAC ATGCTCTCCG ACGTCGCCGC CATGCTGACC
GGCTCGCTCG GCATGCTGCC ATCGGCCTCG CTCGGCGCGC CTGACGGTAA GACCGGCAAG
CGCAAGGCGC TCTACGAGCC GGTGCACGGC TCCGCCCCCG ACATCGCCGG CAAGGGCATC
GCCAATCCGA TCGCCATGAT CGCCTCCTTC GCCATGTGCC TGCGTTACTC CTTCAATCTG
GTGAAGGAAG CCGACGATCT GGAAAAGGCG ATCGCCAACG TGCTCGACAA GGGCATCCGC
ACCGGCGACA TCATGGCCGA TGGCGCAAGG CAGGTCGGCA CCGTCGAGAT GGGCGATGCG
ATCCTTGCCG AGTTCAAGAC GCTTTCCGCC TGA
|
|---|
| Protein sequence | MTVRNLFLLP GDGIGPEAMG EVRKIIAYMN EAMGAGFVTD EGLVGGSAYD AHGAAISEAD
MVKALAADAV LFGAVGGPKW DSVPYEVRPE AGLLRLRKDL QLFANLRPAI CYPALASASS
LKPELVEGLD ILIIRELTGG VYFGEPKEII DLGNGQKRGI DTQVYDTYEI ERIAGVAFEM
ARTRQNRVCS MEKRNVMKSG VLWNQVVTET HKAKYSDVQL EHMLADAGGM QLVRQPKQFD
VIVTDNLFGD MLSDVAAMLT GSLGMLPSAS LGAPDGKTGK RKALYEPVHG SAPDIAGKGI
ANPIAMIASF AMCLRYSFNL VKEADDLEKA IANVLDKGIR TGDIMADGAR QVGTVEMGDA
ILAEFKTLSA
|
|---|
| |