Gene Rleg2_3855 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_3855 
Symbol 
ID6982618 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011369 
Strand
Start bp3997834 
End bp3999375 
Gene Length1542 bp 
Protein Length513 aa 
Translation table11 
GC content61% 
IMG OID643398577 
ProductABC transporter related 
Protein accessionYP_002283343 
Protein GI209551426 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1129] ABC-type sugar transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.585208 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.343425 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGTCA GCCCGACAAC CATGGCCGCC GTGCGTGCGA GCGGCGCAGT TCCGAATGCG 
GAATATCTGT TGAGCGCCGA AGGCGTTCGC AAGGAATTTC CGGGTGTCGT CGCCCTCGAC
GACGTGCAGT TCCGGCTGAA GCGCGCCTCG GTGCATGCGC TGATGGGCGA AAACGGCGCC
GGCAAATCGA CGCTGATGAA GATCCTCGCC GGCATCTACA TACCCGACAA AGGCGATATC
CGCCTGAAAG GCATCGAGAT CCAGCTGAAA TCTCCGCTCG ACGCGCTGGA GAATGGCATC
GCCATGATCC ATCAGGAACT GAACCTGATG CCATTCATGA CGGTCGCCGA AAACATCTGG
ATCCGCCGCG AACCGAAGAA CCGCTTCGGC TTCGTCGATC ACGGCGTGAT GCATCGCATG
ACCGAAGAGC TTTTTGCCCG GCTGAATATC GACATCGATC CCGATATCGA GGTCCGGTAC
CTGTCGGTCG CCAACCGGCA GATGGTCGAG ATCGCCAAGG CGGTTTCCTA TAATTCCGAC
GTGCTGATCA TGGACGAGCC GACTTCGGCG CTGACGGAGC GCGAGGTCGA GCACCTCTTC
CGCATCATCC GCGACCTGAG GGCCCAGGGC ATCGGCATCG TCTACATCAC CCACAAGATG
AACGAGCTGT TCGAGATCGC CGACGAGTTC TCGGTCTTCC GCGACGGCCG CTATATCGGC
ACGCATGCCT CGACCGACGT CACCCGCGAC GACATCATCC GGATGATGGT CGGGCGCGAG
ATCACCCAGA TGTTCCCGAA GGAAGAGGTG CCGATCGGCG AGGTCATGCT CTCGGTCAAG
GATCTCTGCC TCAACGGCGT CTTCAAGAAC GTCTCCTTCG AGGTGAGGGC GGGCGAGATC
CTCGGCGTGG CCGGCCTGGT GGGGTCCGGG CGGTCGAATG TCGCCGAAAC ATTGTTCGGC
GTGACGCCGG CAAGCTCCGG TTCGATCGAG CTCTACGGCA AGCCGGTGAC GATTTCTTCG
CCGACCGAGG CCATCCGCCA CCAGATGGCC TTCCTGACCG AGGACCGCAA GGACACCGGC
TGTCTGCTGA TCCTCGATAT TCTCGAAAAC ATGCAGATCG CCGTTCTCCA GGACAGATAT
GTCAAGGGCG GCTTCGTGCA GCAGGGCGCC ATCGAGGCGA CCTGCGAAGA CATGGCAAAA
AAGCTGCGGG TGAAGACGCC CAATCTTTAC GAGCGGGTGG AAAATCTGTC CGGCGGCAAT
CAGCAGAAGG TGCTGATCGG GCGCTGGCTG CTCACCAATC CGCGGATCCT CATCCTCGAC
GAGCCGACGC GCGGCATCGA TGTCGGCGCC AAGGCGGAAA TTCACCGGCT GGTCACCGAC
ATGGCGCGAA ACGGCGTGGC GGTGATCATG ATCTCGTCCG AGATGCCCGA GGTGCTCGGG
ATGAGCGATC GCATCATGGT CATGCATGAG GGGCGCGTGA CCGGTTTCCT CAATCGCGAT
GAAGCAACGC AGATCAAGGT GATGGAGCTG GCTGCGCAGT GA
 
Protein sequence
MAVSPTTMAA VRASGAVPNA EYLLSAEGVR KEFPGVVALD DVQFRLKRAS VHALMGENGA 
GKSTLMKILA GIYIPDKGDI RLKGIEIQLK SPLDALENGI AMIHQELNLM PFMTVAENIW
IRREPKNRFG FVDHGVMHRM TEELFARLNI DIDPDIEVRY LSVANRQMVE IAKAVSYNSD
VLIMDEPTSA LTEREVEHLF RIIRDLRAQG IGIVYITHKM NELFEIADEF SVFRDGRYIG
THASTDVTRD DIIRMMVGRE ITQMFPKEEV PIGEVMLSVK DLCLNGVFKN VSFEVRAGEI
LGVAGLVGSG RSNVAETLFG VTPASSGSIE LYGKPVTISS PTEAIRHQMA FLTEDRKDTG
CLLILDILEN MQIAVLQDRY VKGGFVQQGA IEATCEDMAK KLRVKTPNLY ERVENLSGGN
QQKVLIGRWL LTNPRILILD EPTRGIDVGA KAEIHRLVTD MARNGVAVIM ISSEMPEVLG
MSDRIMVMHE GRVTGFLNRD EATQIKVMEL AAQ