Gene Rleg2_3854 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_3854 
Symbol 
ID6982617 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011369 
Strand
Start bp3996774 
End bp3997799 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content62% 
IMG OID643398576 
ProductMonosaccharide-transporting ATPase 
Protein accessionYP_002283342 
Protein GI209551425 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.297382 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTACCA AGGCAGCAGA GGGCGCCGCT CCGCTCGCAA CCCGGCAAAG GCGGCGGCGT 
TTACCGACCG AGCTCAGCAT TTTTCTCGTG CTCGTCGGCA TCGCGCTCAT CTATGAAGTG
CTCGGCTGGA TGTTCATCGG CCAAAGCTTC CTGATGAATT CGCAGCGTCT GACGATCATG
ATCCTGCAGG TCTCCGTCAT CGGCATCATC GCCGTCGGCG TCACCCAGGT CATCATCACC
GGCGGAATCG ATCTTTCCTC GGGCTCGGTC GTCGGCATGA CGGCGATGAT CGCGACAAGC
TTCGCCCAGT CGTCGACCTG GGGACGGGCG GTCTTTCCCT CGCTGACCGA CCTGCCGGCT
GTCGTGCCGA TCATGGTCGG CCTGCTGATC GGAGCGGCGG CCGGTCTCGC GAACGGTGCG
CTTATCGCCT ACACGAAAAT CCCGCCATTC ATTGCAACGC TCGGCATGTT CGTTTCGGCC
CGCGGTGTGG CGAAGTGGTA TACGAAGGGA CAGCCGGTCT CCGGGATCAC CGAGCAGTTT
CACTTCATCG GAACCAAGGC CTGGCCGGTC GTAGTCTTCC TGGTCGTTGC GCTGATCTTT
CATATTGCGC TGCGCTACAC CCGTTATGGC AAGTTCACCT ATGCCATCGG CGCCAACCCG
CAGGCAGCCC GCGTTTCCGG CATCAACATC GAGGCGCATC TCGTCAAGGT CTATGTGATT
GCCGGATTGC TCGCCGGCCT TGCCGGTATC GTCACGGCGG CACGTGCGGA AACCGCGCAG
GCCAGCATGG GCGTCGGATA TGAACTCGAT GCGATCGCCG CGACCGTCAT CGGCGGCACT
TCGCTCACCG GCGGCGTCGG GCGCATCACC GGCACCGTCA TCGGCACCAT CATCCTCGGC
GTCATGACCT CGGGCTTTAC CTTCCTCAGG ATCGACGCCT ATTACCAGGA GATCGTCAAG
GGCCTGATCA TCGTTGCCGC TGTGGTCATC GACGTCTACC GGCAGAAGAA GCGCCGCAAG
CACTGA
 
Protein sequence
MSTKAAEGAA PLATRQRRRR LPTELSIFLV LVGIALIYEV LGWMFIGQSF LMNSQRLTIM 
ILQVSVIGII AVGVTQVIIT GGIDLSSGSV VGMTAMIATS FAQSSTWGRA VFPSLTDLPA
VVPIMVGLLI GAAAGLANGA LIAYTKIPPF IATLGMFVSA RGVAKWYTKG QPVSGITEQF
HFIGTKAWPV VVFLVVALIF HIALRYTRYG KFTYAIGANP QAARVSGINI EAHLVKVYVI
AGLLAGLAGI VTAARAETAQ ASMGVGYELD AIAATVIGGT SLTGGVGRIT GTVIGTIILG
VMTSGFTFLR IDAYYQEIVK GLIIVAAVVI DVYRQKKRRK H