| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_3699 |
|---|
| Symbol | hemC |
|---|
| ID | 6982461 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011369 |
|---|
| Strand | + |
|---|
| Start bp | 3826937 |
|---|
| End bp | 3827866 |
|---|
| Gene Length | 930 bp |
|---|
| Protein Length | 309 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 643398421 |
|---|
| Product | porphobilinogen deaminase |
|---|
| Protein accession | YP_002283188 |
|---|
| Protein GI | 209551271 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0181] Porphobilinogen deaminase |
|---|
| TIGRFAM ID | [TIGR00212] porphobilinogen deaminase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAACAA AACCTTTCCG GATCGGCACG CGGGGCAGCC CGCTGGCGCT TGCCCAGGCG
CATGAGGCCC GCGACAGGCT GATGGCGGCG CATCATCTGC CCGAAGAGAT GTTCGAGATC
GTCGTGCTGT CGACCAAGGG CGATCGCATC ACCGACCGGT CGCTGGCTGA GATCGGCGGC
AAGGGCCTCT TCACCGAGGA GCTCGAACAG CAGCTTACCA CAGGCGAGCT GGATTTCGCC
GTGCACTCCG CCAAGGACAT GCCGACGAAG CTGCCCGACG GCCTCCATCT CTCCGCCTAT
CTGCCGCGCG AGGATATCCG CGACGCCGTC ATCGGCCGCA CCGCGCCCAA ACTGATCGAC
CTGCCGCATG GCGCCACCGT CGGCTCCTCG TCGCTGCGCC GCCAGGCACT GATCCGCCGC
ATGCGGCCCG ATATCAATGT CGTGACCTTC CGCGGCCTGG TGGAAACGCG CCTGCGCAAG
CTCGAAGAAG GCCAGGTCGA CGCCACCTTG CTGGCCCTTG CCGGCCTGAA ACGGCTGGGC
AAGGTCGAGG TTCTCACAGA TATTCTCGAC CCCGACACCT TCCCGCCGGC GCCGGCGCAG
GGGGCGATCT GCCTCGAAAG CCGCATCGGC GATACTCAGA TCGACGATCT GCTGGCGCCG
GTCAACGATG CCGCGACCTT CGACACCGTC TCCTGCGAAC GCGCCTTCCT CGCCGCGCTC
GACGGCTCCT GCCGCACACC GATCGGCGGT TATGCCGTCT GCGAAGGCGA TCTGATCCGC
TTCTCCGGCC TCATCATCAC CCCCGACGGC CGCAGCCAGC ATGCGGTGAC GACCGACGGC
CACCGCCGCG ATGCGGCCGC ACTCGGCACC CGCGCCGGCC AGGACGTGCG CGCAAGGGCC
GGCAGCGCCT TTTTCGACGA CTGGCACTGA
|
|---|
| Protein sequence | MQTKPFRIGT RGSPLALAQA HEARDRLMAA HHLPEEMFEI VVLSTKGDRI TDRSLAEIGG
KGLFTEELEQ QLTTGELDFA VHSAKDMPTK LPDGLHLSAY LPREDIRDAV IGRTAPKLID
LPHGATVGSS SLRRQALIRR MRPDINVVTF RGLVETRLRK LEEGQVDATL LALAGLKRLG
KVEVLTDILD PDTFPPAPAQ GAICLESRIG DTQIDDLLAP VNDAATFDTV SCERAFLAAL
DGSCRTPIGG YAVCEGDLIR FSGLIITPDG RSQHAVTTDG HRRDAAALGT RAGQDVRARA
GSAFFDDWH
|
|---|
| |