Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg2_3560 |
Symbol | |
ID | 6982321 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
Kingdom | Bacteria |
Replicon accession | NC_011369 |
Strand | + |
Start bp | 3688058 |
End bp | 3688855 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 643398285 |
Product | Rhomboid family protein |
Protein accession | YP_002283053 |
Protein GI | 209551136 |
COG category | [R] General function prediction only |
COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.27249 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCATAC CTTTTCATGA CGCCAACACG CTGAAATATA TCAAGGTGCA GTGGGTGACG CTCTCACTGA TCGCGCTGAA TATTGCGGTC TGGCTCTTTA CCAGCCTGGA GAGCGAGCAA GCAGCCCAGG CAACGACCGT CGGGCTCGGC TATATTCCGG CGATCGCCTT TGGCGACGCG GTGCTGGCGC AGGGGCTGGA AATCGTGCCG GAGCCGCTGA CCTACCTCAC CTATGCCTTC GTCCATTCCG GCTTCTGGCA TCTGGCCTCC AACATGATCT TCCTCTGGGT CTTCGGCGAC AATGTCGAGG ATGCCATGGG ACATCTGCGC TTCCTGATTT TCTATCTCCT TTGCGCGGCT GCCGGCGCGC TCTGCCACGG CCTGCTGACC ATGACATCGC AAGCGCCGCT GGTCGGCGCC TCGGGGGCGA TTTCCGGTGT GATTGCCGCC TATGTCTTGC TGCATCCGCG CGTCAAGGTC TGGGTTCTGG TCTTCTTCCG CGTGCCGCTG CCGCTGCCGG CCTTCGTGCC GCTGCTTTTG TGGATCGGCC AACAATTCTT CATGCTGGCG GTCGCACCCG ACGGCGACGT TTCCTGGGGC GCACATGTCG GCGGCATCCT TGCCGGAGCG CTTCTGATCC TGGTGTTGCG CCGGCCGGGT GTGCCGCTCT TCGACCGGGA AATCGTCACA CCCCGGGCTG TGCGAAGCGA TCCCGGCGCC GGTCCGGCCA TCGCCGTCGA CGCAGCCGGG CGCAAGGTTC AACGCCTTCC CTGGGGGCGG CGCCGACAAG AATATTGA
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Protein sequence | MFIPFHDANT LKYIKVQWVT LSLIALNIAV WLFTSLESEQ AAQATTVGLG YIPAIAFGDA VLAQGLEIVP EPLTYLTYAF VHSGFWHLAS NMIFLWVFGD NVEDAMGHLR FLIFYLLCAA AGALCHGLLT MTSQAPLVGA SGAISGVIAA YVLLHPRVKV WVLVFFRVPL PLPAFVPLLL WIGQQFFMLA VAPDGDVSWG AHVGGILAGA LLILVLRRPG VPLFDREIVT PRAVRSDPGA GPAIAVDAAG RKVQRLPWGR RRQEY
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