Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg2_3524 |
Symbol | prfA |
ID | 6982284 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
Kingdom | Bacteria |
Replicon accession | NC_011369 |
Strand | - |
Start bp | 3653038 |
End bp | 3654117 |
Gene Length | 1080 bp |
Protein Length | 359 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 643398248 |
Product | peptide chain release factor 1 |
Protein accession | YP_002283017 |
Protein GI | 209551100 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0216] Protein chain release factor A |
TIGRFAM ID | [TIGR00019] peptide chain release factor 1 |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0303051 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGCGAAGC TTCCCGTTGA AAAGATGCGC GAGCTGGAAC GCCGTTTCGG CGAGATCGAA GCGCGCATGT CGGCCGGCCC GGCTGCCGAT GTCTATGTGA AGCTCGCATC CGAATATTCC GAGCTGCAGC CGGTCGTGAC GAAGATCCGC GCCTATGAAA AGGCGATTGC CGAGCTTGCC GATCTCGAAA CGCTCCTCGA GGACAAGTCG GTCGATCGCG AAATGCGCGA CCTCGCCGAG CTGGAGCTGC CCGAGGTGAA AGAGCAGATC GAGGCGCTCG AGCAGGAGAT GCAGATTCTG CTTCTGCCGA AGGACGCAGC GGACGAAAAA AGCGCGATCC TCGAAATCCG CGCCGGCACG GGCGGATCGG AAGCGGCCCT TTTTGCCGGC GATCTCTTTC GTATGTATGA GCGTTTTTCG GCGGAAAAAG GCTGGAAGGT GGAGGTTCTC TCAGCAAGCG AAGGCGAAGC CGGCGGTTAC AAGGAAATCA TCGCGACGAT CACCGGCAGA GGCGTCTTCG CCAAGCTGAA ATTCGAATCC GGCGTGCATC GCGTGCAGCG TGTGCCTGAG ACCGAGGCGG GCGGGCGCAT CCATACGTCG GCCGCAACGG TTGCAGTGCT GCCGGAGGCC GAGGAGATCG ACATCGAGAT CCGGCCGGAA GATATCCGCA TCGACACGAT GCGCTCTTCG GGCGCGGGCG GCCAGCACGT CAATACGACG GACTCGGCGG TGCGCATCAC CCATCTGCCG AGCGGCATCG TTGTCACCAG CTCGGAAAAA TCGCAGCACC AGAACCGCGC CAAGGCGATG CAAGTGCTGC GCTCCAGGCT CTACGACGCC GAGCGGCAGA GGGCCGACAG CGAGCGCTCG GCCGACCGCA AGAGCCAGGT CGGTTCCGGC GACCGCTCCG AACGCATTCG CACCTATAAT TTCCCGCAGG GGCGCATAAC CGATCATCGC ATCAATCTGA CGCTCTATAA GCTCGACCGG ATGATGGAAG GTGAGATCGA GGAAGTCGTC GATGCGCTGA TGGCCGACTA CCAGGCAAGC CAGCTGGCGC AGCTCGGCGA GCAGCAATGA
|
Protein sequence | MAKLPVEKMR ELERRFGEIE ARMSAGPAAD VYVKLASEYS ELQPVVTKIR AYEKAIAELA DLETLLEDKS VDREMRDLAE LELPEVKEQI EALEQEMQIL LLPKDAADEK SAILEIRAGT GGSEAALFAG DLFRMYERFS AEKGWKVEVL SASEGEAGGY KEIIATITGR GVFAKLKFES GVHRVQRVPE TEAGGRIHTS AATVAVLPEA EEIDIEIRPE DIRIDTMRSS GAGGQHVNTT DSAVRITHLP SGIVVTSSEK SQHQNRAKAM QVLRSRLYDA ERQRADSERS ADRKSQVGSG DRSERIRTYN FPQGRITDHR INLTLYKLDR MMEGEIEEVV DALMADYQAS QLAQLGEQQ
|
| |