| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_3498 |
|---|
| Symbol | |
|---|
| ID | 6982252 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011369 |
|---|
| Strand | - |
|---|
| Start bp | 3615231 |
|---|
| End bp | 3617435 |
|---|
| Gene Length | 2205 bp |
|---|
| Protein Length | 734 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 643398216 |
|---|
| Product | ribonucleotide-diphosphate reductase subunit alpha |
|---|
| Protein accession | YP_002282991 |
|---|
| Protein GI | 209551074 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0209] Ribonucleotide reductase, alpha subunit |
|---|
| TIGRFAM ID | [TIGR02506] ribonucleoside-diphosphate reductase, alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.68822 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGACACGG GAACAACTCT GACGCGGGAT GCGGGCGCAA AATCGCATAA CAGTTTTGCT
CATCCCGCCG GCGAACGCCC TTTGAAAGCG GCGGAAGCGC TCGATTATCA CGCGCTGAAC
GCCATGCTGA ACCTCTATGA CGATGAGGGC AGGATCCAGC TCGACAAGGA CCGCATGGCG
GCGAAGCAGT ATTTCCTGCA GCATGTGAAC CAGAACACCG TGTTCTTTCA CAATCTGAGG
GAAAAGCTCG ATTACCTCGT GACCGAGGGC TATTACGAGC AGGAGGTTCT CGACCAATAT
TCCTTCAATT TCGTCCGCGA CCTGTTCGAC CAGGCCTATG CCAGGAAATT CCGTTTTCCG
ACTTTCCTCG GCGCCTTCAA ATATTACACC AGCTATACGC TGAAGACCTT CGACGGAAAG
CGCTATCTCG AGCGCTACGA GGATCGCATC TGCATGGTCG CGCTGAGTTT GGCGCGTGGC
GACGAGGCCC TTGCCCGCGA CATGGTCGAC GAGATCATTT CCGGCCGTTT GCAGCCGGCG
ACGCCGACTT TCCTCAATGC CGGCAAGAAA CAGCGCGGCG AACTCGTCTC CTGCTTCCTG
CTGCGGGTCG AGGACAATAT GGAATCGATC GGCCGCTCGA TCAATTCGGC GCTGCAGCTG
TCCAAGCGCG GTGGCGGCGT AGCGCTGTCG CTGACGAACA TCCGCGAGGC CAGCGCGCCG
ATCAAGCAGA TCGAGAACCA GTCGTCGGGC ATCATCCCGG TGATGAAGCT GCTCGAAGAC
AGTTTCTCCT ATGCCAACCA GCTCGGCGCC CGCCAGGGGG CGGGTGCCGT CTATCTCAAC
GCCCATCACC CCGATATCAT GCGCTTCCTC GACACCAAGC GCGAGAATGC AGACGAGAAG
ATCCGCATCA AGACGCTATC GCTCGGCGTC GTCGTGCCCG ACATCAGCTT CGAACTCGCG
AGGAATAACG AGGACATGTA CCTGTTCTCG CCCTATGACG TGGAGCGCAT CTATGGGGTG
CCCTTTACCG AGATTTCGGT GACGGAAAAG TATCGGGAGA TGGTGGCGGA CGCCCGTATC
TCGAAGAAGA AGATCAAGGC GCGCGAATTC TTCCAGGTGA TCGCCGAAAT CCAGTTCGAG
AGCGGTTATC CCTACATCAT GTTCGAGGAC ACGGTGAACC GGGCGAACCC GATTGCCGGG
CGGATTTCAA TGAGCAATCT CTGCTCGGAG ATCCTGCAGG TCAGCGAGGC GAGCGAATAC
AATGACGACC TCTCCTACAA ACATCTCGGC AAGGATATTT CCTGCAATCT CGGCTCGCTG
AACATTGCCG CAGCCATGGA TTCCGCCGAT TTCGGCAAGA CGATCGAGAC CTCGATCCGG
GCGCTGACGG CGGTCTCCGA CATGAGCCAC ATCGCCTCGG TTCCCTCGAT CGAAAAGGGC
AACGACGAGA GCCACGCGAT CGGCCTCGGC CAGATGAACC TGCACGGATA CCTCGCCCGC
GAACGTATCT TTTACGGTTC CGAGGAAGGC GTCGATTTCA CCAACATCTA TTTCTATACG
GTGACCTATC ACGCGATCCG CGCCTCGAAC CTGTTGGCGG TCGAGCGCGG CACAAGCTTC
AAGGGGTTCG AGAACTCGAA ATATGCCTCC GGCGAATATT TCGACAAATA TACCGAGCAG
GAATGGCAGC CGGCGACGGA GAAGGTGCGG GCGCTGTTCG ATAATGCCGG CATCCCTGTT
CCGACACAGG AAGACTGGTT GGCGCTGAAG ACGGCTGTCA TGACCTCCGG TCTCTATAAC
CAGAATCTGC AGGCGGTGCC GCCGACCGGG TCGATCTCCT ATATCAACCA CTCGACCTCC
TCGATCCATC CGATCGTTTC GAAGATCGAG ATCCGCAAGG AAGGCAAGAT CGGCCGCGTC
TATTATCCGG CGCCGTTCAT GACCAACGAC AATCTCGATT ATTACCAGGA TGCCTACGAG
ATCGGGCCGG AGAAGATTAT CGACACCTAT GCGGCGGCGA CCCAGCATGT CGACCAGGGC
CTGTCGCTAA CCTTGTTCTT CCGCGACACG GCGACGACGC GCGACATCAA CAAGGCGCAG
ATCTACGCCT GGAAGAAGGG CATCAAGACG ATCTACTACA TCCGCCTTCG CCAGATGGCG
CTGTCCGGCA CCGAGGTGCA GGGCTGCGTG TCTTGCACGC TGTAA
|
|---|
| Protein sequence | MDTGTTLTRD AGAKSHNSFA HPAGERPLKA AEALDYHALN AMLNLYDDEG RIQLDKDRMA
AKQYFLQHVN QNTVFFHNLR EKLDYLVTEG YYEQEVLDQY SFNFVRDLFD QAYARKFRFP
TFLGAFKYYT SYTLKTFDGK RYLERYEDRI CMVALSLARG DEALARDMVD EIISGRLQPA
TPTFLNAGKK QRGELVSCFL LRVEDNMESI GRSINSALQL SKRGGGVALS LTNIREASAP
IKQIENQSSG IIPVMKLLED SFSYANQLGA RQGAGAVYLN AHHPDIMRFL DTKRENADEK
IRIKTLSLGV VVPDISFELA RNNEDMYLFS PYDVERIYGV PFTEISVTEK YREMVADARI
SKKKIKAREF FQVIAEIQFE SGYPYIMFED TVNRANPIAG RISMSNLCSE ILQVSEASEY
NDDLSYKHLG KDISCNLGSL NIAAAMDSAD FGKTIETSIR ALTAVSDMSH IASVPSIEKG
NDESHAIGLG QMNLHGYLAR ERIFYGSEEG VDFTNIYFYT VTYHAIRASN LLAVERGTSF
KGFENSKYAS GEYFDKYTEQ EWQPATEKVR ALFDNAGIPV PTQEDWLALK TAVMTSGLYN
QNLQAVPPTG SISYINHSTS SIHPIVSKIE IRKEGKIGRV YYPAPFMTND NLDYYQDAYE
IGPEKIIDTY AAATQHVDQG LSLTLFFRDT ATTRDINKAQ IYAWKKGIKT IYYIRLRQMA
LSGTEVQGCV SCTL
|
|---|
| |