| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_3485 |
|---|
| Symbol | |
|---|
| ID | 6982239 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011369 |
|---|
| Strand | + |
|---|
| Start bp | 3600935 |
|---|
| End bp | 3601756 |
|---|
| Gene Length | 822 bp |
|---|
| Protein Length | 273 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 643398203 |
|---|
| Product | short chain dehydrogenase |
|---|
| Protein accession | YP_002282978 |
|---|
| Protein GI | 209551061 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.591182 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACGG ATCACGGCCG CCTCGACGGC AAGATCGCCA TCGTCACCGG CGGCACCCAG
GGGTTGGGCG CCACCATCGC CCGTCTCTTC GCCGAACGCG GTGCCGAAGG CATCGTCATT
TGCGGCCGCA ACGAAGCCAA GGGCCAGGCG AAGGCCAATG AGATTTCGGC CGCGACCGGC
GTGAAGGTCG TCTACGTCAG GGCCGACCTC GGCAAGGTCG AGGACGCCAG CAATGTCGTC
CACGCCTGCG ATGAGGCCTT CGGCCGGGTC GACGCGCTGG TCAATGCCGC TGCCATCACC
GATCGCGGCA CCATCCTCGA CACCAGCCCT GAACTCTTCG ACGCCATGTT CGCCGTCAAC
GTGCGCGCAC CGTTCTTCCT GATGCAGGAG GCGGTGAAGG TCATGCGCCG CGAAAAGATC
GAGGGCACGA TCGTCAACAT CGGCTCGATG TCGGCCAAGG CAGGCCAGCC GTTCATCGCC
GCCTATTGCG CCTCCAAGGG CGCGCTGGAA ACGCTGACGA AGAACACAGC CTATGCGCTG
CTGCGCAACC GCATCCGCGT CAACGGCCTC AACATCGGCT GGATGGCTTC CGAAGGTGAG
GATCGGATCC AGCGCGAATT TCACGACGCC CCCGCCGACT GGCTGGAGAA GGCGGCAGCA
AGCCAACCCT TCGGCCGCCT CGTCGATCCG CACGAGGTGG CGCGCGCCTG CGCCTATCTG
TCGTCTGCCG AATCCGGCCT GATGACCGGC TCGGTCATTT GCTTCGACCA GTCGATCTGG
GGCGCCTATG ACGGCTCGCC GCATCCGGTG GCGGCACTCT GA
|
|---|
| Protein sequence | MSTDHGRLDG KIAIVTGGTQ GLGATIARLF AERGAEGIVI CGRNEAKGQA KANEISAATG
VKVVYVRADL GKVEDASNVV HACDEAFGRV DALVNAAAIT DRGTILDTSP ELFDAMFAVN
VRAPFFLMQE AVKVMRREKI EGTIVNIGSM SAKAGQPFIA AYCASKGALE TLTKNTAYAL
LRNRIRVNGL NIGWMASEGE DRIQREFHDA PADWLEKAAA SQPFGRLVDP HEVARACAYL
SSAESGLMTG SVICFDQSIW GAYDGSPHPV AAL
|
|---|
| |