Gene Rleg2_3438 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_3438 
Symbol 
ID6982192 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011369 
Strand
Start bp3553388 
End bp3554365 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content62% 
IMG OID643398156 
Producttranscriptional regulator, DeoR family 
Protein accessionYP_002282931 
Protein GI209551014 
COG category[K] Transcription 
COG ID[COG2390] Transcriptional regulator, contains sigma factor-related N-terminal domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.909409 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTCAAGC TTAAACGCGG CACGCACACG GCCTTTTCGG AAGCATCCTC GCTGCGGCTG 
AGGGCTGCGT GGCTCTACTA TAATGAGGGC CTGACCCAGA AGGACGTCGC AGAACAGCTC
GGCATCAGCC GTACCACCGT CATCCGTCTG CTCGATGAGG CGATGAAGCG CAGCGAAGTC
CAGATCTGGA TCAACGATTC GATCGGCGAT TGCGTCGAAC TTGCGGTAAA GTTGGAGCGC
GCCTACGGCC TCGACGAGGC GATCGTCGTA CCATCACCCA TCGGCAGCGA CGTCAATTCG
CTGGCAAAGA ATGTCGGCCT GGCGCTTGGC CAGTTCCTCT CCGAAGCCAT CCCGGACGAT
TATACGATCG GCGTCGGCTG GGGCCGGACC ATGACCGCCT CGCTGTCGAG CTTCCGGCCG
CCGCGCCGCG CCAATTGCAA GGTCGTCTCG CTGCTCGGCG GCATCGTCGC CGTGCACCAG
ACGAACCCGA TCGATTACAC ATGGCGGCTG GCCAATCAGC TCGGCGCCGA ATGTTATATG
TTCCTGGCGC CACTCCTCGT CGATTCCGTC GAGACCAAGC GCAATCTGAT CGAGAAATGC
GGGCTGGACA CGATTTACCG TCTGGCCGAG AGCCTTGATC TGGCGATCGT CAGCTGCGGC
GATATCGGCC CGCATTCGAC CTCGCTGTCG GAGGGCTGGA TCTCGAAAGC CGAGCTGCGG
GAGCTGATCG CTGCCGGCTG CGTCTGCGAC ACCATGTTCA ACTTCCTCGA CAAGGACGGC
AATTCGGTCG ACCACTCGAT CAATCGGCGC GTCATGTCCG TCGATCTCGA CACGCTGAAG
GAGGCCAAGC ATATCGTGCT CTCCTCCGGC GGCGCCCACC GCGCCGTCGC CATCCGCGCC
ACGATCAAGC GCATCGGCTG CAATACGCTG ATCACCGATG AAAGTGCGGC ACGGGCGCTG
CTGGAACTGG CAGAGTGA
 
Protein sequence
MVKLKRGTHT AFSEASSLRL RAAWLYYNEG LTQKDVAEQL GISRTTVIRL LDEAMKRSEV 
QIWINDSIGD CVELAVKLER AYGLDEAIVV PSPIGSDVNS LAKNVGLALG QFLSEAIPDD
YTIGVGWGRT MTASLSSFRP PRRANCKVVS LLGGIVAVHQ TNPIDYTWRL ANQLGAECYM
FLAPLLVDSV ETKRNLIEKC GLDTIYRLAE SLDLAIVSCG DIGPHSTSLS EGWISKAELR
ELIAAGCVCD TMFNFLDKDG NSVDHSINRR VMSVDLDTLK EAKHIVLSSG GAHRAVAIRA
TIKRIGCNTL ITDESAARAL LELAE