| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_3420 |
|---|
| Symbol | lysS |
|---|
| ID | 6982174 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011369 |
|---|
| Strand | + |
|---|
| Start bp | 3536620 |
|---|
| End bp | 3538113 |
|---|
| Gene Length | 1494 bp |
|---|
| Protein Length | 497 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 643398138 |
|---|
| Product | lysyl-tRNA synthetase |
|---|
| Protein accession | YP_002282913 |
|---|
| Protein GI | 209550996 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1190] Lysyl-tRNA synthetase (class II) |
|---|
| TIGRFAM ID | [TIGR00499] lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.491262 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGACA AGACCGAAAA CACCCTTTCC TCCGACGTGA CTGAGGTGCG CGCCCAGAAG
CTGAAGCTGC TGCGCGAGCA GGTCGGCGAC GTCTATCCGG CGCATTTCCA CCGGACGCTG
ACCAATGCCG AGCTCGGCGC CAAGTACGAA TCTCTGGAAT CCGACGTCGA GACGCAGGAT
GTCGTCACCG TCGCCGGCCG CGTCTATTCC TCGCGCAACT CCGGCATGTT CATGGATATC
CATGACGCTT CCGGCAAGAT CCAGATCTTC AGCCACAAGG ACACGACGCC GGAAGAGGCC
CGCGCTTTGC TGCCGATGAT CGACATCGGC GACATCATCG GCGTGACCGG CATCGTGCGC
CGCACCAAGC GCGGCGAGCT GACGATCAAC GCCCAGAAGA TCGAGATGCT GACCAAGTCG
CTGCTGCCGA TGCCCGAGAA GTGGCACGGC CTCTCCGACA TCGAGCTGCG GTATCGCAAG
CGCCATCTCG ACATCATGAC CAACGAGGAT TCGAAGCTTC GCTTCCAGCA GCGCTCGAAG
ATCGTCTCCG GCATCCGCCG CTTCATGGAG AATGACGGCT TCATGGAAGT CGAGACGCCG
ATGCTGCAAT CGATCTATGG CGGCGCCACC GCCGAGCCGT TCAAGACGCA TCACAACACG
CTGAAGCTCG ACATGTATCT GCGCATCGCG CCGGAACTGT TCCTGAAGCG CACGCTGGTA
TCGGGCCTCA CCGACAAGGT CTTCGAGATC AACCGGAACT TCCGCAACGA AGGCGTCTCC
ACCCGGCACA ATCCCGAGTT CACGATGATG GAGTGTTACT GGGCCTATGC CGATTACGAG
GACATGATGG ACCTCGTCGA GCGGCTGTTC GAAACCCTGG CGCTCTCCAT CCATGGCACC
ACCGAATTCG ATTTCGGCGA CAAGCAGCTG TCCTTCAAGG GTCCGTTCAA GCGCGTACCG
ATGCCTGACG CCGTCAAGCA AGTGACCGGC ATCGATTTCC TTGCGATCAA GACCGACGAG
GAAGCACGCA CTGCTGCCAA GGCTGCCGGC TTCGCGGTCG AGAAGGACTG GACCTGGGGC
GAATGCCTTG CCTTCATCTT CGAGGAAAAG GTTGAATCCA CACTGATCCA GCCGTCTCAC
GTCACGCATT TCCCGAAGGA CATCTCACCC TTCGCCAAGG AAGTGCCGGG CGAACCGCGC
CTCGTCGAGC GCTTCGAGAC CTATTGCAAC GCCTGGGAAC TCGGCAACGC CTTCTCCGAG
CTCAACGATC CCGAAGAGCA GCGCCGCCGC ATGGTCGAGC AGCTCGAACA GGCGCATGCC
CGCGGCGAAA AGGAAAAGCA GTTGGACGAG GAATTCCTCG ACGCGATCGA CCAGGGCATG
CCGCCGGCCG GCGGCCTCGG CATCGGCGTC GACCGCCTGA TCATGCTTTT GACCAACGCC
CCGTCGATCC GCGACGTCAT CCTCTTCCCG GCCCGCCGCA ACAAGGCCGA CTGA
|
|---|
| Protein sequence | MNDKTENTLS SDVTEVRAQK LKLLREQVGD VYPAHFHRTL TNAELGAKYE SLESDVETQD
VVTVAGRVYS SRNSGMFMDI HDASGKIQIF SHKDTTPEEA RALLPMIDIG DIIGVTGIVR
RTKRGELTIN AQKIEMLTKS LLPMPEKWHG LSDIELRYRK RHLDIMTNED SKLRFQQRSK
IVSGIRRFME NDGFMEVETP MLQSIYGGAT AEPFKTHHNT LKLDMYLRIA PELFLKRTLV
SGLTDKVFEI NRNFRNEGVS TRHNPEFTMM ECYWAYADYE DMMDLVERLF ETLALSIHGT
TEFDFGDKQL SFKGPFKRVP MPDAVKQVTG IDFLAIKTDE EARTAAKAAG FAVEKDWTWG
ECLAFIFEEK VESTLIQPSH VTHFPKDISP FAKEVPGEPR LVERFETYCN AWELGNAFSE
LNDPEEQRRR MVEQLEQAHA RGEKEKQLDE EFLDAIDQGM PPAGGLGIGV DRLIMLLTNA
PSIRDVILFP ARRNKAD
|
|---|
| |