| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_3402 |
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| Symbol | |
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| ID | 6982156 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011369 |
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| Strand | - |
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| Start bp | 3512878 |
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| End bp | 3515088 |
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| Gene Length | 2211 bp |
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| Protein Length | 736 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 643398120 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_002282895 |
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| Protein GI | 209550978 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.111622 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGACAG CCGGAAAGTC GCAGAGCAAG GGTTTGGGAG TAGGCCGTCA CATCACCGTT
ACGGGCGTGC TTTTTTCCTT TGCCGTCATC GTCGCAATTG TCACCGTCAT GGTGCTGACG
GCGCTCGAGC GCGTGGCCGA AAATGCCAAT CTTCTCGATG ACGAGCGCTC GCGCGAAACG
ACGATCGGGG CGTTGAAGAC TTTCGAGGAC CAGCTCGCCG CGACGCTCGA CGATTACGCA
GCCTGGGACG ATGCCGCCGT CAACGTCTAT TCGCCCGACG GCATGGCCTG GACGGTGAGC
AATTACGGCG AGATGTCGGT CAACAGTTCG CTTTTCGACA TGGCGATCGT CATCGATGAC
GGCAAGAAGC CGATCATGGC CTATCGCGAC GGCAAGCCGA TGGAGGAGCC GCTTGCGGAT
TTCTTCGCGC CGTCGCTCTG GACCCTGTTC GAGACGGCGA AGGCCGACAC GGCCGGGACT
CCCCAAGCAG TCGGCTTTGT CACCACCAAA CGCGGTATCG CCGCTGTCGG CGTCGCCCTG
GTGCGGAAAA AATCCGGTGC GCTGGATGCG CCGGCCGGCC AGCACCGCTA TCTCGTCTTC
GCCCGCCACC TCGACAATGA CCGGGTGACC GCGCTCGGCC AGACCTATGT CATCGGCGGG
CTGAGGCTGG CGCCGGCGAG CTTCGAGGCC GATTATTTTG TGCCGATCGT CGATCCGACG
GGAACAACGC TTCAAAAGCT CGTTTGGACC TCGCGTTCGC CGGGTGATGT CGGCTACGCA
CAGGTGCGGC CGATGGTCCT GCAAGCGCTC GGCCTTGTCG GGCTGTTCTT CGCGGTGCTG
CTGGTCATCG GCTGGTTTGC CGGCCGCCGG CTGAAGGCCG ATGAAAACAG CGCCCGCGAA
GAGACGCTGC GCGACCGGCT GAGCGGCCTT TCCAATCGCG ACGGTCTTGG GCTTGCTGTC
GACCGTTTCG TCGTCGAGGC GCGCCAGACC AAACGCAACG TGCTGCTCCT CTATCTCGAC
CTCGACGGTT TCAAGGAAGT CAATGACAGT TATGGCCACG GCACCGGCGA TCAGTTGATC
CGCGGGGTGG CGGCCGGTCT CGACGTGCTT ATTCCGCAAG GCGCGGTTCT CGCCCGCATC
GGCGGCGATG AATTTGCGAT CGCCTTTCTC TCGGACGGCG AGAATGCTGC GGCCCTGCAA
CTTGCCGAGC AGATCCTTGA TTTTCTGGTC GAGCCGCTGG AGATCGGTCG CCGCGTCGTT
GTTGTCGGGG CCAGCATCGG CATCGCCATG TCGCCTGCCG GCACGATCGG GCGCGAGGAA
CTGGTGCGCC GCTCCGACCT TGCCATGTAC AAGGCGAAAG AAGCCGGCCG TGCGCGCATG
ACGCTTTACG ATCCGTCGAT GGATGCCGAC CGGGAGCAGC GCAATGCGCT GGAACTCGAC
CTCAGGATGG CCATCGAAAG CGGCGATCTG ACGCTTGCCT ACCAGCCGCT GATCGATGCG
GCCTCCTATG CGCCGACCGG CGTCGAGGCG CTGGTGCGCT GGAACCGTCC AGGTCATGGC
CCTATCTCGC CTGAGGTGTT CATCCCGATC GCCGAGACCA GCGGCCTCAT CGAATCGCTC
GGCCTGTTCG TGCTGCGCAA GGCCTGCGAG ACAGCCAAGC AATGGCCGGA ACTCAACGTT
TCGGTCAACG TCTCTCCCGG TCAGTTCCGC AATCCCGCCT TCGCCGATTA TGTGCGCTAC
GTGCTGAAGC AGACGGAGGT CGAGGCCGGC CGCATCACGC TCGAGATCAC CGAAGGCTAC
ATGATCCAGA ATCCGCAGCG CACCCGCCAG TCGATCGAAC GGCTGAAGGC GCTGGGGGTC
AAGGTGGCGC TGGACGATTT CGGCTCCGGC TTCTCCTCTA TCGGTTATCT CAGGCAGTTC
GGCTTCGACC GCATCAAGAT CGACCGCTCA CTGGTCATGG GGGTCAATGA GGACAAGCGC
CAGCGCGAGA TGCTGCAGGC GACCGTGGCG CTTGCCCGCT CTCTCGACAT TCCGGTGACG
GCCGAGGGCA TCGAGACCGA GGAGCAGGCA ATCGCCATGC GCCTCTTCGG CTGCGATTGC
CTGCAGGGTT ATCTGTTCGG AAAGCCGATG ACGGCCGATC TGATCACCGA GATGCTGCAC
GCGCGGCATG CAGCCGAGCC GGAAGGCCGG CGCCGTCTTG GCGCAGCCTG A
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| Protein sequence | MQTAGKSQSK GLGVGRHITV TGVLFSFAVI VAIVTVMVLT ALERVAENAN LLDDERSRET
TIGALKTFED QLAATLDDYA AWDDAAVNVY SPDGMAWTVS NYGEMSVNSS LFDMAIVIDD
GKKPIMAYRD GKPMEEPLAD FFAPSLWTLF ETAKADTAGT PQAVGFVTTK RGIAAVGVAL
VRKKSGALDA PAGQHRYLVF ARHLDNDRVT ALGQTYVIGG LRLAPASFEA DYFVPIVDPT
GTTLQKLVWT SRSPGDVGYA QVRPMVLQAL GLVGLFFAVL LVIGWFAGRR LKADENSARE
ETLRDRLSGL SNRDGLGLAV DRFVVEARQT KRNVLLLYLD LDGFKEVNDS YGHGTGDQLI
RGVAAGLDVL IPQGAVLARI GGDEFAIAFL SDGENAAALQ LAEQILDFLV EPLEIGRRVV
VVGASIGIAM SPAGTIGREE LVRRSDLAMY KAKEAGRARM TLYDPSMDAD REQRNALELD
LRMAIESGDL TLAYQPLIDA ASYAPTGVEA LVRWNRPGHG PISPEVFIPI AETSGLIESL
GLFVLRKACE TAKQWPELNV SVNVSPGQFR NPAFADYVRY VLKQTEVEAG RITLEITEGY
MIQNPQRTRQ SIERLKALGV KVALDDFGSG FSSIGYLRQF GFDRIKIDRS LVMGVNEDKR
QREMLQATVA LARSLDIPVT AEGIETEEQA IAMRLFGCDC LQGYLFGKPM TADLITEMLH
ARHAAEPEGR RRLGAA
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