Gene Rleg2_3390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_3390 
Symbol 
ID6982144 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011369 
Strand
Start bp3502850 
End bp3503983 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content62% 
IMG OID643398108 
ProductOrn/DAP/Arg decarboxylase 2 
Protein accessionYP_002282883 
Protein GI209550966 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0019] Diaminopimelate decarboxylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.151925 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCC AGCGCATCCG CGACTTTCTC GCAACCCGAC GTCCCGACGG TCCCTGCCTC 
GTGGTTGACC TCGACGTCAT CAGCGACAAT TTCCACGCCT TCCGTCACGC AATGCCGGAC
AGCGCCATCT ACTACGCCGT CAAGGCCAAC CCGGCCCCGG AAGTGCTGAA GCTGCTTGCA
GGCCTCGGCT CCAATTTCGA TTGCGCATCC GTTGCCGAAA TCGAAATGGC GCTCGAAGCC
GGTGCGACCG CCGCCCGCAT CTCCTTTGGC AACACGATCA AGAAGGAACG TGACGTTGCC
CGCGCGCATG CGCTCGGCGT CAGCCTCTTT GCCGTCGACA GCCACGAGGA AGTCGAGAAG
ATCTCGCGTG CCGCTCCCGG CGCCCGCGTC TTCTGCCGCG TGCTGACGGA TGGCGAAGGC
GCCGAATGGC CGCTGTCGCG CAAGTTCGGC TGCGTCCCGC AGATGGCTGT CGATGTTCTC
GTCTACGCCC ATCAGCTCGG CCTGCTGTCC TACGGCGTCT CGTTCCATGT CGGTTCTCAG
ATGACCAAGG TCGATGCCTG GGATTCGGCG CTTGCCGATG CCAAGCGTGT CTTCGTCTCG
CTTGCCAAGC AGGGTATCCA CCTGCAGATG GTCAACATGG GCGGCGGCTT CCCGACCAAG
TATCTGCGCG ACGTTCCGTC CGCAGAAGCT TACGGCAAGT CGATCTACCA GGCGCTGCGC
ACGCATTTCG GCAACCAGAT TCCGCAGACC ATCATCGAGC CGGGCCGCGG CATGGTCGGC
AATGCCGGCG TTATCAAGGC TGAAGTCGTG CTGATCTCGA AGAAGTCGGA CAATGACGAT
GCGCGCTGGG TATTCCTCGA CATCGGCAAG TTCGGCGGTC TCGCCGAGAC GATGGACGAA
GCCATCCGCT ATCCGATCCG CACGGAGCAC GACGGCGACG AGATGGAGCC CTGCGTCATC
GCCGGCCCGA CCTGCGATTC GGCCGACGTG CTCTACGAGA AGAACCTCTA TCCGCTGCCG
ATCTCCCTTT CGATCGGCGA CGAGGTCCTG ATCGAAGGTA CCGGCGCCTA TACGACGACC
TATTCGGCGG TCGCTTTCAA CGGTTTCGAG CCGCTGAAGG CCTACGTCAT CTGA
 
Protein sequence
MTTQRIRDFL ATRRPDGPCL VVDLDVISDN FHAFRHAMPD SAIYYAVKAN PAPEVLKLLA 
GLGSNFDCAS VAEIEMALEA GATAARISFG NTIKKERDVA RAHALGVSLF AVDSHEEVEK
ISRAAPGARV FCRVLTDGEG AEWPLSRKFG CVPQMAVDVL VYAHQLGLLS YGVSFHVGSQ
MTKVDAWDSA LADAKRVFVS LAKQGIHLQM VNMGGGFPTK YLRDVPSAEA YGKSIYQALR
THFGNQIPQT IIEPGRGMVG NAGVIKAEVV LISKKSDNDD ARWVFLDIGK FGGLAETMDE
AIRYPIRTEH DGDEMEPCVI AGPTCDSADV LYEKNLYPLP ISLSIGDEVL IEGTGAYTTT
YSAVAFNGFE PLKAYVI