| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_3387 |
|---|
| Symbol | |
|---|
| ID | 6982141 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011369 |
|---|
| Strand | - |
|---|
| Start bp | 3499672 |
|---|
| End bp | 3500829 |
|---|
| Gene Length | 1158 bp |
|---|
| Protein Length | 385 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 643398105 |
|---|
| Product | diguanylate cyclase |
|---|
| Protein accession | YP_002282880 |
|---|
| Protein GI | 209550963 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2199] FOG: GGDEF domain |
|---|
| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.610096 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.24043 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGCTGG ATCTCAGGAC GATCTATTTC ATTGTTGCCG TGAGCTGCTT TGTGCTTGGT
ATTCTCCAGC TCGCAGCCTA TGCGACCGGC CGCTTCGAGA GATGGCCGCT CTGGTGGGGC
CTGAGCAACC TGCTTGTCGG CGTCGGTTCG TTCCTCGTCG CGCTGCGCAA TCTCGTTCCC
TATTCGGTCT CGGTCGACGG CGGCAATATC GTGACCATTG CCGGCTACAT GCTGATGTTC
TTCGCCGTGC GGGTCTTTGC CGGCCGGGCC CTTAACCAGC GCTATTTCTG GCTTGCCATC
TTTCTCGTCA GCGTGCCTGT CGCACTTATT GTCAGCGATC CCTCGGCGGT GTCGGCGAGG
CTCCTCTATG TCTCGGTCAT CTGCTGTCTC TGCGACCTTG CCGTCGCAAG TGAGGCAGTC
GGTGTAGCCC GGCGTGAGAA GCTTTATTCG GCAGTCCTGC TCGTCGGTCT GTATGTCTGC
ACTGCGATGA TCTTTGCGGT GCGCAGCATT CTTGCCGCGA CCGGCGAGAT CGGCGGGCCG
GATCCTTTCG GCGGCAGTGT CGTCCATAGC TGGATGGCGG TATCGGCGGT CGCGTTCATC
ATGCTGCGCG GCATGGCTAT GGTACTGATG GCCGCCGAGC GCAGCCGAAA TCAGCTGACC
GAACTCGCCC ACCACGATCC GCTGACCGGC GCGCTCAATC GCGGCGGCCT TGCCCAGCGC
CTGCCGGCTC TCGGTTCCCA GCCGGTATCG CTGCTCATCA TCGACATCGA CCATTTCAAG
CAATTGAACG ACCGGCATGG CCATGCGAGT GGCGACGATA TCCTGCGGCT TTTCGCCAGT
GTTTCGAGAA GCATCATGGG CTCGAACGAT CTGCTCGCCC GTCAGGGTGG CGACGAGTTC
CTGGTGGTGC TGAAGGATGT TTCCGGGCAG GATGCGGTGG CGATTGCCGA GCGCATCCGT
CTCGCCTTCG CCGCCGCCGT CCTGCATCAG CCGGATCTGG CCGTCTTTCC GACGCTGAGC
ATCGGCGTTG CCACGCGCGG GAAAAGCGGC GGAGATTTTG AACAGCTGAT AAAGAAGGCG
GATGAGGCGC TTTACCGTTC GAAGCGCGAA GGCCGCAACC GGGTCAAAGC CTTCGGCGAA
AATCAGCAGG CTGCGTAA
|
|---|
| Protein sequence | MLLDLRTIYF IVAVSCFVLG ILQLAAYATG RFERWPLWWG LSNLLVGVGS FLVALRNLVP
YSVSVDGGNI VTIAGYMLMF FAVRVFAGRA LNQRYFWLAI FLVSVPVALI VSDPSAVSAR
LLYVSVICCL CDLAVASEAV GVARREKLYS AVLLVGLYVC TAMIFAVRSI LAATGEIGGP
DPFGGSVVHS WMAVSAVAFI MLRGMAMVLM AAERSRNQLT ELAHHDPLTG ALNRGGLAQR
LPALGSQPVS LLIIDIDHFK QLNDRHGHAS GDDILRLFAS VSRSIMGSND LLARQGGDEF
LVVLKDVSGQ DAVAIAERIR LAFAAAVLHQ PDLAVFPTLS IGVATRGKSG GDFEQLIKKA
DEALYRSKRE GRNRVKAFGE NQQAA
|
|---|
| |