| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_3374 |
|---|
| Symbol | |
|---|
| ID | 6982128 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011369 |
|---|
| Strand | - |
|---|
| Start bp | 3486634 |
|---|
| End bp | 3487740 |
|---|
| Gene Length | 1107 bp |
|---|
| Protein Length | 368 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 643398092 |
|---|
| Product | TRAP dicarboxylate transporter- DctP subunit |
|---|
| Protein accession | YP_002282867 |
|---|
| Protein GI | 209550950 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG4663] TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component |
|---|
| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.626283 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.630322 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATCGTC GTTCGTTTTT CAAGAAGGCG GGAACCGCCA GCGCCGGCGC GGTCGCCGCA
ACGGCATTGG CAGCGCCTGC GATCGCGCAG GAGAATCCGA AGATCGCGTG GCGCATGACG
TCGTCGTTTC CGAAGAGCTT GGATACGATC TATGGCGGCG CCGAGGACAT CGCCAAGCAT
GTCGCCGCTG CGACAGACGG CAATTTCACG ATCCAGCCTT TTGCGGCCGG TGAAATCGTG
CCTGGCCTGC AGGCCGTTGA TGCGGTGGCC GCCGGCACGG TCGAGGCCGC CCACACGACC
TCCTATTATT TCGTCGGCAA GGACCCGACC TACGCCATCG GAACGGCCAT TCCGTTTGGC
CTCAACAGCC GCCTGACCAA TGCCTGGTTT TACGAGGGCA ACGGCAACAA GCTGATGAAT
GAATTTTATG CCACACAGGG CATGTATGCG CTGCCTGCCG GCAATACCGG TGCGCAGATG
GGCGGCTGGT TCCGCAAGGA AATCAATACG CTCGATGACC TCAAGGGCGT CAAGATGCGC
ATTGCCGGTC TTGCCGGCCG CGTCATGGAG AAGGTCGGCG TCATCCCGCA GCAGATTGCC
GGCGGCGACA TCTATCCGGC GCTGGAAAAA GGCACGATCG ATGCGGCGGA ATTCGTCGGC
CCCTATGACG ACCTGAAGCT CGGCTTCCAC AAGGTGGCGA AGTACTACTA CTATCCGGGC
TGGTGGGAAG GCGGCCCGAC CGTGCATGGT TTCTTCAACC TTGAAAAATG GAGCAGCCTG
CCGAAGCATT ATCAGGCCGC ACTCACCGAT GCCTGCGCCT TCGCCAACAC CAACATGCTG
GCAAAGTACG ACTCCAAGAA TCCGACGGCG CTGAAGCAGC TCGTTGCAGA AGGTGCGACG
CTGCGCCCCT TCAGCCAGGA AATCATGGAA GCCTGCTTCC AGGCGGCGAC CGGCATCTAC
AGCGAAATCT CCGGCACCAA CCAGTATTTC AAGAAGATCT ACGACGACCA GACCGCCTTC
AAGCGGGACG CCTATCTCTG GATGCAGCTT TCGGAATACA CTTTCGATAC GTTCATGATG
ATCCAGCAGC GGGCCGGAAA GCTCTGA
|
|---|
| Protein sequence | MDRRSFFKKA GTASAGAVAA TALAAPAIAQ ENPKIAWRMT SSFPKSLDTI YGGAEDIAKH
VAAATDGNFT IQPFAAGEIV PGLQAVDAVA AGTVEAAHTT SYYFVGKDPT YAIGTAIPFG
LNSRLTNAWF YEGNGNKLMN EFYATQGMYA LPAGNTGAQM GGWFRKEINT LDDLKGVKMR
IAGLAGRVME KVGVIPQQIA GGDIYPALEK GTIDAAEFVG PYDDLKLGFH KVAKYYYYPG
WWEGGPTVHG FFNLEKWSSL PKHYQAALTD ACAFANTNML AKYDSKNPTA LKQLVAEGAT
LRPFSQEIME ACFQAATGIY SEISGTNQYF KKIYDDQTAF KRDAYLWMQL SEYTFDTFMM
IQQRAGKL
|
|---|
| |