| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_3269 |
|---|
| Symbol | |
|---|
| ID | 6982022 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011369 |
|---|
| Strand | - |
|---|
| Start bp | 3361087 |
|---|
| End bp | 3361740 |
|---|
| Gene Length | 654 bp |
|---|
| Protein Length | 217 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 643397986 |
|---|
| Product | thiamine-phosphate pyrophosphorylase |
|---|
| Protein accession | YP_002282762 |
|---|
| Protein GI | 209550845 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0352] Thiamine monophosphate synthase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 43 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.706731 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGAAC CGGAAAACCG CTGCCGCCTT GTGCTCATCG TCCCCGATAT TGCCGATGCC
GATGAACAGG CAAGGATCGT TGCCGACGCG CTGAAGGGCG GCGATGTCGC TTCGGTGATC
GTGCCGCAAT ACGGGCTCGA CGACGGTACC TTCCAGAAAC ATGCGGAGAA GCTGGTGCCG
CTGATCCAGG ATGCCGGGGC GGCCGCCCTG ATTGCAGGCG ACAGCCGCGT GGCAGGACGG
GCAAAGGCCG ACGGCCTGCA CCTTTCCGGC AATGCCGAGG CACTTTCGGA AGCGATCGAA
AAACATGCGC CGAAGCTGAT CGTCGGCGGC GGCAACGCAG CCGACCGGCA CAATGCGCTG
GAGATCGGCG AGGCCAGGCC GGATTATATT TTCTTCGGCA AGCTCGACGG CGATATCAAG
CCGGAGGTCC ATCCGAAGAA CCTTGCGCTC GGCGAATGGT GGGCCTCGAT GATCGAGATT
CCCTGCATCG TCATGGGCGG CACCGATCCG GCCTCGGCGC TTGCCGTCGC CGAGACCGGA
GCGGAATTCG TGGCGCTGCG GCTGGCTGTC TTCGGCGAGC CCAACCGGGC GCCGTCTATC
GTCGCCGAAG TCAACGCTTT GCTTGACGAA AAAGCGCCAC GGTTTGAGGA TTGA
|
|---|
| Protein sequence | MTEPENRCRL VLIVPDIADA DEQARIVADA LKGGDVASVI VPQYGLDDGT FQKHAEKLVP
LIQDAGAAAL IAGDSRVAGR AKADGLHLSG NAEALSEAIE KHAPKLIVGG GNAADRHNAL
EIGEARPDYI FFGKLDGDIK PEVHPKNLAL GEWWASMIEI PCIVMGGTDP ASALAVAETG
AEFVALRLAV FGEPNRAPSI VAEVNALLDE KAPRFED
|
|---|
| |