| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_3253 |
|---|
| Symbol | |
|---|
| ID | 6982006 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011369 |
|---|
| Strand | + |
|---|
| Start bp | 3341741 |
|---|
| End bp | 3342991 |
|---|
| Gene Length | 1251 bp |
|---|
| Protein Length | 416 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 643397970 |
|---|
| Product | putative RNA polymerase, sigma-24 subunit, ECF subfamily |
|---|
| Protein accession | YP_002282746 |
|---|
| Protein GI | 209550829 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG4941] Predicted RNA polymerase sigma factor containing a TPR repeat domain |
|---|
| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.178478 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGCCCG ATGCCGGACG CGCCGCCGAA CAGGTGGCGC GTCAGTCCTA CGGCAAACTG
ATCGCCTTTC TCGCCGCCCG CTCGCGTGAC GTGCCGGCGG CGGAAGACGC ATTGTCGGAA
GCGCTGGCTT CGGCCCTTCG CGTCTGGCCG GAGCGCGGCG TTCCCGACAA GCCGGAAGCC
TGGCTGCTGG TGGCCGCACG CCGCAACCTG ATGCAGGCCG CCCGCCACCG CACCGTCGCG
GCCAATGCGC AGACGACGAT AACCGTCGCC TTCGAGGAGG CGGAGGAACG CATGAACGAG
GCCGGCAAAG CCGTCTTTCC CGATGAGCGG CTGAAGCTGC TCTTCGCCTG CACCCATCCC
GCCATCGACA GCTCCGTGCA TACCGCGCTG ATGCTGCAGA CTGTTCTCGG CATCGAGGCG
AAAACCATCG CACGGGCCTT CGTCGTTTCG CCGGAGGCGA TGAGCCAGCG GCTGGTGCGG
GCCAAGGTGA AGATTCGCGA TACCGGCATT CCCTTCGCCG TTCCCCCTCG TCCCGCCCTG
CCGGAGCGGC TCGCTGCCGT GCTTTCGGCG ATCTACGCCG CCTACGGCCT CGGATGGGAC
GGTCTCGACG GCGAGGAAGA GCGCCATTCG CTTGCCGGCG AAGCGATCTG GCTCGGCCGC
GCGCTTCTGG CGGTGCTGCC GGACGAACCG GAAGCGATCG GCCTGCTGTC GCTGATGCTT
CACTGCGAGG CCCGCCGCAG CGCCCGGCGC GATTGCAATG GCCGATATGT GCCGCTGGAC
GAGCAGGATA CGGCGGCCTG GAACGCAATC ATGATCGCCG AGGCGGATGC GCTGCTGCGC
AAGGCCGGAG GTTTTAACCG TTTCGGTCCC TTTCAGTGCC AGGCTGCGAT CCAATCCGTG
CACGCGGCGC GCCGGCTTTC GGGAACGACC GATTGGCCGG CGCTGACAAC GCTCTACGCG
GCGCTGGTCA CGATGAAACC CACGCTCGGC GCACACGTCG CCGAAGCAGC GGTGATCGGC
AGGGCCCTCA GTGCCGCCGC TGGCCTGGCG CGGCTCGACA GGCTCGATCC GCGCGATACT
GCGGCCTATC AGCCCTATTG GGCCGTGCGT GCCTTTCTTC TCGCACGCGC CGGCGACGAT
GCCGCAGCAG TCGACGCCTA CATGACGGCG ATCGGCCTCA GCGACAGCCC CGCCGTGGGT
GATTTTCTCG CTGACCGGCT GAAGGAGGCG CGGCAAGGGA CGCTGGGCTG A
|
|---|
| Protein sequence | MPPDAGRAAE QVARQSYGKL IAFLAARSRD VPAAEDALSE ALASALRVWP ERGVPDKPEA
WLLVAARRNL MQAARHRTVA ANAQTTITVA FEEAEERMNE AGKAVFPDER LKLLFACTHP
AIDSSVHTAL MLQTVLGIEA KTIARAFVVS PEAMSQRLVR AKVKIRDTGI PFAVPPRPAL
PERLAAVLSA IYAAYGLGWD GLDGEEERHS LAGEAIWLGR ALLAVLPDEP EAIGLLSLML
HCEARRSARR DCNGRYVPLD EQDTAAWNAI MIAEADALLR KAGGFNRFGP FQCQAAIQSV
HAARRLSGTT DWPALTTLYA ALVTMKPTLG AHVAEAAVIG RALSAAAGLA RLDRLDPRDT
AAYQPYWAVR AFLLARAGDD AAAVDAYMTA IGLSDSPAVG DFLADRLKEA RQGTLG
|
|---|
| |