Gene Rleg2_3177 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_3177 
Symbol 
ID6981928 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011369 
Strand
Start bp3260237 
End bp3261808 
Gene Length1572 bp 
Protein Length523 aa 
Translation table11 
GC content61% 
IMG OID643397893 
Productdiguanylate cyclase/phosphodiesterase 
Protein accessionYP_002282670 
Protein GI209550753 
COG category[T] Signal transduction mechanisms 
COG ID[COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.178264 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.217843 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGTGT TTTTCCAGAG CAGGGCCGGA AGGCAATGCG TATCGATCGT CGGGCTTGGG 
ATAACTCTCT GGCTCCTCGG CGCGCTTTTG CAGCTTGACG ACAGCCTTGT CTTCTTCATG
ACCGGTTTCG GCGAATATGG TGCCGACAAA CTCGTTCTGG CTCTCGGCAT CGCCGGCGCC
ATGAGCTTCA TCTATTCGGT GCTGCGCATC GCCGACCTGC GCAAGGAAAC GGAACTGCGC
GCCGCCGCCC AGGCGAAGGC CGATTGGACC GCAACTCACG ACCATCTGAC CAAGCTGCCG
AACCGCTACG CCTTCGAACG CAAGATCCTG TCACGGCCGA TCAAGGACGA CGAGGACCAG
GTCGAGGAGT GGGACCAGAA CGTCACGCTT TTCTCCGTCG ATCTTGACGG CTTCAAGAAA
GTCAACGATC TCGTCGGCCA CAAGGGCGGC GATATTCTGC TCATCGAGGT TGCCAGAAGG
ATCTGCGCGC TCGGCAATGC CGATTGCGTC TATCGCTTCG GCGGCGACGA ATTCATCATT
GTCGCCTTTG CCCTGACGGC GCAGCGCGAG GAGCGTTTTG CCAAATTGTT GATCCAGGCG
GTCACCCGGC CGATCCATAT CGATGGTTTT GCCGTCGAAG TCGGCGCCAG CGTCGGCTAC
GACCGCTGGG CCGAGGGAAC CGAACCGCTG GAGGATGCCG CTCATCGGGC CGACCTCGCC
ATGTACGAGG CGAAATCACG CGGCCCCAAC CATTATTTGG TTTTCGAACC GGCTATGCAG
GACAAAGTTG CGGAACGCGC TGCGCTGGAA ACCAGGCTAC GTGCCGCAAT CTCCAACAAG
GCGATCAAAC CCTTTTATCA GCCGCTGATC GACCTGAAGA CCGGGCAGCT CTGCGGCTTC
GAGGCGCTGG CGCGCTGGAT CGGCGAGGAT GGCATCAATA TCCCGCCGCC GGTCTTCATC
GATATCGCCG AGGAAACCGG GATGATCACG GCCTTGTTCG AGGATCTTCT CGCCCAGGCC
TGCAGCGACG CGCTCACCTG GCCGGACCAT GTGATGCTGT CCTTCAACGT CTCGCCGGTA
CAGATGGAAG ACAGGCTGCT GACGTCGCGC ATTCTCAAGG TGCTTTCGGC AAGCCGGCTG
CCGCCGCATC GCCTGGAAGT GGAGATCACC GAAAACGCGT TGATCCAGGA TCCGGCCATC
GCCGCCGTCA TCCTTGATGA ACTGCACGCG GCCGGCATCC AGATCGCGCT CGACGATTTC
GGCACGGGTT ATTCGAGCCT GGCCCAGCTC GCCCGCTATC GTTTCGACAA GATCAAGATC
GACAAAAGCT TCATCGCCAC CTATCGCGGT GACGAACGTC AGGAAAAGAT CGTCCGCGCC
ATGCTTGGCC TCGGTCGGAG CCTCAACATC AAGACCACCG CTGAGGGTGT CGAGGAGCAC
GGCCAGCTCG CCTTCCTGCT GCAGCTCGGC TGCGACATCG GCCAAGGTTA TCTTTTCGGC
AAGGCGATGC CCGCCGCCGA GGCGGGCATC TTCATCAGCG ATCGCAATGC CAGTCTGGCC
TCCACGGCCT GA
 
Protein sequence
MPVFFQSRAG RQCVSIVGLG ITLWLLGALL QLDDSLVFFM TGFGEYGADK LVLALGIAGA 
MSFIYSVLRI ADLRKETELR AAAQAKADWT ATHDHLTKLP NRYAFERKIL SRPIKDDEDQ
VEEWDQNVTL FSVDLDGFKK VNDLVGHKGG DILLIEVARR ICALGNADCV YRFGGDEFII
VAFALTAQRE ERFAKLLIQA VTRPIHIDGF AVEVGASVGY DRWAEGTEPL EDAAHRADLA
MYEAKSRGPN HYLVFEPAMQ DKVAERAALE TRLRAAISNK AIKPFYQPLI DLKTGQLCGF
EALARWIGED GINIPPPVFI DIAEETGMIT ALFEDLLAQA CSDALTWPDH VMLSFNVSPV
QMEDRLLTSR ILKVLSASRL PPHRLEVEIT ENALIQDPAI AAVILDELHA AGIQIALDDF
GTGYSSLAQL ARYRFDKIKI DKSFIATYRG DERQEKIVRA MLGLGRSLNI KTTAEGVEEH
GQLAFLLQLG CDIGQGYLFG KAMPAAEAGI FISDRNASLA STA