| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_3170 |
|---|
| Symbol | |
|---|
| ID | 6981921 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011369 |
|---|
| Strand | - |
|---|
| Start bp | 3254779 |
|---|
| End bp | 3256572 |
|---|
| Gene Length | 1794 bp |
|---|
| Protein Length | 597 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 643397886 |
|---|
| Product | histidine kinase |
|---|
| Protein accession | YP_002282663 |
|---|
| Protein GI | 209550746 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.111612 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.304086 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCGCTGA TCATCTTCGC CTTCTTCACC TATGGAAGCG CAATCGCGAC ACGCGCCTAT
ATGGGGGAGG CCTCGGCGCA GGCGGGAACG GCGCTGCGCC TTGCCGTCTC GGCGCTCAGC
GGTCACCTCA ACCGCTACGA GGCGCTGCCG GCGCTGATCG CCGACCACGA CGACATCAAG
GAACTGGTGA GCGCGCCCGA CGACACAGCC TTGCGCGACG CGGCCAATCT CTATCTCAAG
GAGATCAACG GGCTGCTGAA ATCCTCCGAT ATTTATGTGG TCAAGCCGGA TGGAGAGACG
ATCGCGGCCA GCAATTACGA CGGACCGGGA AGCTTCGTCG GACAGAATTT CAGCTATCGG
CCGTATTTCC AGGATGCGAT CGAAGGCCGG CAGGCGCGGT TCTATGCGCT CGGCACGACC
TCGCTGAAGC GCGGCTATTA TTTCGCTGCG CCGATCAGGA CCGGCGCGGA TATTCGCGGC
GTCATCGTCT TCAAGGTCGA TATCGACATG ATCGAATCCT CCTGGGGCGG TGGCGAATAC
AAGATCTTCG TCTCCGATCC TGAAGGCATC ATCTTCATGT CCGGCAGCCC GGAATGGCTT
TACGGCGCAA TCCTGCCGCT GACGGCCGAC CGTATCGCAC GCACGGAAGC ATCGCGCCGT
TATGCCAATG CCAGGCTGAC GGAGTTGCCG GTGACGCGCC AGCGCTTTGA GCCGCATGAA
CTGATGACCC TTGTCGGCGA ACGGGGCTCA AGCGAATATC TGGTGCTTTC GCACTACATG
TCGGCCGAGG ACTGGACGGT GAACGTGCTG ATGGAGACCA GCTCCATCCG CACCCAGGCG
CGCACCGCGC TTGCGGCGGT CTTTCTCATC CTCTGCATTG CCGGGCTCAC GGTCGCGGTT
CTGCGCCAGC GGCGGGCGCG GCTTGCCGAG CGCATGCAGC TGCAAACAGA GGCCCGCAAC
GAGCTGGAGC GGCGCGTCGA AGAGCGCACT GCCGATCTTG CCCGCGTCAA CAGCCGGATC
GAAGAGGAGA TATCAGAACG GCGTCTGACC GAGCAGCAGC TCCGTCAGAC GCAGGCCGAT
CTGATCCAGG CGGGCAAGCT TGCCGGCCTG GGGCAGATGT CGGCGGCCCT TTCGCATGAG
TTCAATCAGC CGCTCGCCGC CGCCAAGACC TATACGGACA GCGCCTCCGT TCTCATCGAT
CGCGGCCGGA CGGAGGAGGC GCGGGACAAT ATCCGGCGTA TCGGCGGGCT GATCGACCGC
ATGGCCGCGA TCAGCCGGCA CCTGCGCAAT TTCGCCCGCA AACCGAATGA GAAGCTCGGC
TCTGTTTCTC TCGACGAAGC GATGCATGAC ACGCTGGAGA TCATCGCTTG GCGCCTGAAG
GCGGCCGATG CCGAGCTCCG GCTTGATCTG GGAACCCGGC CGCCGGTGGT GCGTGCCGGT
TCGGTGCGTC TGCAGCAAGT GCTGGTGAAT GTGATTTCCA ATGCGGCCGA TGCGGTGGAA
GGGCTGGAGG ACAGACGGAT CGAGGTTTCG GCCTTCGAGG AGGCAGGCAA GGTGGTGCTG
ACAGTGCGGG ACCACGGGCC GGGCGTGCCG GCGGCAATCG CCGAGCGTAT CTTCGATCCC
TTCTTCACGA CCAAGGGTGT CGGCAAGGGG CTCGGTCTCG GGCTGTCGAT CTCCTACAAT
ATCATCAAGG ATTTCGGCGG CAGCCTTTCC GCGGCCAATC ATCCGGAAGG GGGCGCGGTG
TTCCATATCG AGCTGCAATC GGCGGCGGGG CTGATGCCGG AGGCGGCGGA ATGA
|
|---|
| Protein sequence | MPLIIFAFFT YGSAIATRAY MGEASAQAGT ALRLAVSALS GHLNRYEALP ALIADHDDIK
ELVSAPDDTA LRDAANLYLK EINGLLKSSD IYVVKPDGET IAASNYDGPG SFVGQNFSYR
PYFQDAIEGR QARFYALGTT SLKRGYYFAA PIRTGADIRG VIVFKVDIDM IESSWGGGEY
KIFVSDPEGI IFMSGSPEWL YGAILPLTAD RIARTEASRR YANARLTELP VTRQRFEPHE
LMTLVGERGS SEYLVLSHYM SAEDWTVNVL METSSIRTQA RTALAAVFLI LCIAGLTVAV
LRQRRARLAE RMQLQTEARN ELERRVEERT ADLARVNSRI EEEISERRLT EQQLRQTQAD
LIQAGKLAGL GQMSAALSHE FNQPLAAAKT YTDSASVLID RGRTEEARDN IRRIGGLIDR
MAAISRHLRN FARKPNEKLG SVSLDEAMHD TLEIIAWRLK AADAELRLDL GTRPPVVRAG
SVRLQQVLVN VISNAADAVE GLEDRRIEVS AFEEAGKVVL TVRDHGPGVP AAIAERIFDP
FFTTKGVGKG LGLGLSISYN IIKDFGGSLS AANHPEGGAV FHIELQSAAG LMPEAAE
|
|---|
| |