Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg2_3157 |
Symbol | |
ID | 6981908 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
Kingdom | Bacteria |
Replicon accession | NC_011369 |
Strand | + |
Start bp | 3239510 |
End bp | 3240952 |
Gene Length | 1443 bp |
Protein Length | 480 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 643397873 |
Product | RND efflux system, outer membrane lipoprotein, NodT family |
Protein accession | YP_002282650 |
Protein GI | 209550733 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTATCTC TTCGTTTTGC CGCCACACCG GCATTGCTGT TATTATTGTC GGGCTGCGTT GTTGGCCCGG ATCATGTTCC TCCTGAGATG CCGCTGCCCG CCAAATTCGG AGAGGGCGGA ACGAAGAGTG TAGGCGATGT TGCTACCGCC GCCTGGTGGA CCGCCTTCAA CGACCCCAAA CTGAATGGCT ATGTCAAAGC CGGCCTCGAT CAGAACCTGA CTGTCCAGCA GGCGATCGAG CGCATCAATG CGGCCTCCGC CAACGTCACC ACCGCCGGCG CCGGCGCCCT GCCGAACCTG ACGGTCGGCG GCTCACACAC GGTCAGCGGC CAGAGAGGCG AGCTGCGCAC GCAGTTCGAC ACGCGCAACA CCAGTGCCGG CGAAGTCCAG CTGAGCTGGC TGCTCGATCT CTTCGGCCTC TATAAGCGCA GCACCGAGAG CGCGCTTGCT TCGCTCGATT CGGCCTACGC CTCCGCTGAT GTCGCCAAGC TGACCCTGGT GCAGGATCTG GTCTCGAGCT ATATCGACGT TCGCTACTAT CAGCAGCGCC TGGCGCTTTC GAGGGCCAAC CTGAAGTCGC GTCAGGAAAC CTACGAGCTT ACCAAATTCC AGCTTGAAGC CGGCGCAGCC TCGCGTCTTG ACGTCGTCCA GGCCGAAGGC CTGGTACAAT CGACGCTCGC CGAAATTCCC GGCCTCGAAA CCAACATCCG CATATCGGCC CATCACATTG CCACCTTGCT CGGCCTGCCG GCCTCGGCCC TCGTCGACGA ATTGCTGAAG GGTCATGGAC AGCCCGTATT CCGCGGCGGC ATCAACTCCG GCATCCCTGC AGACCTGATC CGCAACCGTC CCGACGTTCG CGTCGCGGAG CGCGATCTCG CCGCCGCAAC GGCCAATATC GGTGTAGCCC AGGCGCAGCT TTATCCGAGC ATCTCGCTCA GCGGTTCGAT CTCGCCGTCC TACATCAACC AGCGCGGCAT CCATGGCGGC CTGACGCCTT GGTCCTTCGG TCCGACCCTC AACCTGCCGA TCTTCGATGG CGGCCGCCTG CGCGCCAACG TCAAGTCTGC ACAGTCCGAC GCCGCGACCG CCTACCTCAA CTGGAAATCG ACGGTGCTGA CCTCCGTCGA GCAGGTTGAG AACGCGCTCG CCGCTGTCCG GCGTGACGCC CGCACGGTCT CGGCACTCCA GGCGCAGGTG AAGACCACGC AGGAAACCCT CGAACTGTCG ACTGCATCTT ACAAGGACGG CGCCTCTTCG TTGCTCGACG TTCTCGACGC GCAGCGCCAG GTTTCGCTCG CCCAGGCAAG CCTTGCCCAG GCAGTTCAGC AGATGGCCAA GGACTATGTC TCCCTCAACA TCGCGGTCGG CGGCGGCTAT GCCCCCGGCG GCAAGACGAC CGTGGCCAAC ACCACTGTCG CGGTGAAGCC GGCCAAGACC TGA
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Protein sequence | MVSLRFAATP ALLLLLSGCV VGPDHVPPEM PLPAKFGEGG TKSVGDVATA AWWTAFNDPK LNGYVKAGLD QNLTVQQAIE RINAASANVT TAGAGALPNL TVGGSHTVSG QRGELRTQFD TRNTSAGEVQ LSWLLDLFGL YKRSTESALA SLDSAYASAD VAKLTLVQDL VSSYIDVRYY QQRLALSRAN LKSRQETYEL TKFQLEAGAA SRLDVVQAEG LVQSTLAEIP GLETNIRISA HHIATLLGLP ASALVDELLK GHGQPVFRGG INSGIPADLI RNRPDVRVAE RDLAAATANI GVAQAQLYPS ISLSGSISPS YINQRGIHGG LTPWSFGPTL NLPIFDGGRL RANVKSAQSD AATAYLNWKS TVLTSVEQVE NALAAVRRDA RTVSALQAQV KTTQETLELS TASYKDGASS LLDVLDAQRQ VSLAQASLAQ AVQQMAKDYV SLNIAVGGGY APGGKTTVAN TTVAVKPAKT
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