Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg2_3113 |
Symbol | |
ID | 6981858 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
Kingdom | Bacteria |
Replicon accession | NC_011369 |
Strand | + |
Start bp | 3182721 |
End bp | 3183491 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 643397823 |
Product | Xylose isomerase domain protein TIM barrel |
Protein accession | YP_002282606 |
Protein GI | 209550689 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3622] Hydroxypyruvate isomerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.787534 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.440249 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGACATT ATTCAGCCTG CATAGAGTGG CTGTTTGCCG AAGAAGGCGA CAGCTTTCCC GATCGCATCC GCCGCGCCCA TGCCGACGGC CTGACGGCGA TCGAATTCTG GCGCTGGACC GACAAGGATC TGGACGCGAT CGAGGCGGCG CTTGATGAAA CCGGCCTTGC CGTCACCAGC ATCGTCGCCG AGCCGATGAT CGCGCTGACC GACGCCGGCA ACCGGCAGGC ATGGCTGAAA GGCTTGGCCC AATCCGTCGC CGCCGCAAAG CGTCTCGGCG CGCCCGTGCT GATTGCCCAG GCCGGCAACG ATCTTCCGGG CGTGACCCGC GAGCAGCAGC GCCGGGCGCT CACCGAAACG CTGAAGGCGG GCGCCGATAT TCTTCGCGGC AGCGGTGTGC GCCTCGGCGT CGAGCCGCTC AACATCCGCA TCGACCATAT CGGCTATTTT CTCGATTCAA CTAGCGAAGG TCTCGACATC ATCGATGACA TCGCCCGCCC CGAGATCGGC ATCGTCTACG ACATCTACCA TTCCGCCGTG ATGGGCGAGC GCACGGAAGA GGTGCTGGAC GGCCGTCTCG ACCGTGTTTT CCACGTCCAT GTCGCCGATC ATCCCGGCCG CAACGAACCG GGCTCAGGCG GCATCGACCT GGCCCACCGC CTCGGCTGGA TCTTCGACAA CGGCTATGAC GGCGCCGTCG GGCTGGAATA CCGGCCGACC AGACCCGGCG CAGACGCAGT CAGGGCCGCG ATCGCCTCGC TTGACGGTTA G
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Protein sequence | MRHYSACIEW LFAEEGDSFP DRIRRAHADG LTAIEFWRWT DKDLDAIEAA LDETGLAVTS IVAEPMIALT DAGNRQAWLK GLAQSVAAAK RLGAPVLIAQ AGNDLPGVTR EQQRRALTET LKAGADILRG SGVRLGVEPL NIRIDHIGYF LDSTSEGLDI IDDIARPEIG IVYDIYHSAV MGERTEEVLD GRLDRVFHVH VADHPGRNEP GSGGIDLAHR LGWIFDNGYD GAVGLEYRPT RPGADAVRAA IASLDG
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