Gene Rleg2_3099 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_3099 
Symbol 
ID6981844 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011369 
Strand
Start bp3166409 
End bp3167152 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content63% 
IMG OID643397809 
Productshort chain dehydrogenase 
Protein accessionYP_002282592 
Protein GI209550675 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0900092 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTCCA ACGAAAACGG CAAGGTCGCA CTGATCACCG GTGCTTCCCG CGGCATCGGC 
GCGGCTGTCG CTCAACGCCT CGCCAGGGAC GGTTTTACCG TCGTCATCAA TTATTCCGGC
AACACCGCCC CGGCCGAGGA ACTCGCCCGG GAGATCGAGC AGGCCGGTGG CAAGGCGCTG
ACCGAGAAAG CCGATGTCAG CGATGCGCAA GCCGTCCGCC GCATGTTCGA TGCCGCGGAA
ACCGCCTTTG GCGGCATCGA TGTTCTCGTC AACAATGCCG GCATCATGAT GCTCTCGTCG
CTCGCCGAGG CCGATGACGC CAATTTCGAC CGGCAGATCG CCGTCAACCT CAAGGGCACC
TTCAATACAC TCCGCGAAGC GGCTAGACGC TTACGCGACG GCGGCCGGAT CATCAACTTC
TCCACCTCGG TCGTCGGGTT GAAGCTCGAG GCCTACGGGG TCTATGCCGC GACCAAGGCT
GCCGTCGAAA CCTTGACGGC GATCATGGCC AAGGAGATGC GCGGCCGCAA CATCACCGTC
AACGCCATCG CGCCCGGTCC TGTCGCTACC GATCTTTTCC TCAATGGCAA GTCGGAGGAG
CTCATCACCC GCATGGCGAA GATGAACCCG TTGGAGCGTC TCGGCACACC TGAGGATATC
GCCGCCGCCG TGGCCTTCCT CGCCGGTCCG GGCGGCGGCT GGATCAATGG TCAGACGCTG
CGCGCCAATG GCGGGATGAT CTGA
 
Protein sequence
MASNENGKVA LITGASRGIG AAVAQRLARD GFTVVINYSG NTAPAEELAR EIEQAGGKAL 
TEKADVSDAQ AVRRMFDAAE TAFGGIDVLV NNAGIMMLSS LAEADDANFD RQIAVNLKGT
FNTLREAARR LRDGGRIINF STSVVGLKLE AYGVYAATKA AVETLTAIMA KEMRGRNITV
NAIAPGPVAT DLFLNGKSEE LITRMAKMNP LERLGTPEDI AAAVAFLAGP GGGWINGQTL
RANGGMI