| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_3092 |
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| Symbol | |
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| ID | 6981837 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011369 |
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| Strand | - |
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| Start bp | 3154937 |
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| End bp | 3156742 |
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| Gene Length | 1806 bp |
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| Protein Length | 601 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643397802 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_002282585 |
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| Protein GI | 209550668 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.275422 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0228529 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAGCTT CTAAGGCTGA GACCGCGTTG CCAGAAAATA GACCCACACG ATCCGAACAA
GAGTTTCAGG ATCTTCTGCG CCGGCTCGAA CTCGCTCTCG ATGCATCCCG GATCGGTGTC
TGGGAGCACA GCATCGCAAC GAGCGGGATC TTGTGGGATG CGCAGATGCA CCGTCTCTAC
GAAACCGGCG AGACATGCCG GGAAGTGCCG GCATGGTTAT GGTCGAATGC GATCCATCCC
GACGACCGCG AGCAAGCCGA ATACGACTTC GACCAGGCGA TCGCCACCCG GGGCGCCTAT
AATTCGCAAT TTCGGATCGT GCTGCCGAGC GGCGAAATCC GCCATCTGAG GTCACGCGCA
CATTTCTACG TGGATGCGGA GGGGCTGCCC TCCTTCATCG GCGCCGAATG GGATGTCACC
GCCGACGTCC TGCTTAACGC TGAACTCGCC GGCCAGAAGA TGGTGGCCGA GGCGAGAGCC
CTGGCGCTCG AGGAAAGCAA TGCGCGCATC GAGCATGTCG CCGATCACGA CTATCTCACC
GGCCTGCCGA ACCGGCGTCT TCTCGACAAG CGGCTCGCCG AGCTGCCGGC CGACAGGAGC
ATCACCACGC TTGGCGTCCT GCATCTCGAT CTCGACCAGT TCAAGCAGAT CAATGACAGT
CACGGTCATG CCGCAGGCGA CGCGGTTCTG AGGGCCGCAG CCCTTCGCAT CACTGCCGCC
ATTCCCGCAA ATGGCATGGT CGCCCGCGTC GGCGGCGACG AATTCGTCAT CGTGCTGGTC
AATTTCAGCG ATCTCGCTGA ATTGAAACTC ATTACCGACG ACCTTCAGCG CCGGCTGCGG
AAGAAGATCC GCTTCGGTCA GGAGATGCTG CAATCCGGCG CCTCGATCGG CGTTTCCTGG
AGCGGCGATC GGCGGGCGCG CAGCCTGCTT GCCGAATCCG ATCTGGCGCT CTACCAGGCC
AAGAAGCTCG GGCGCAACCG CGTCGAATTC TTCACGCGGC AACTGCGTCG CCTCGCCGAA
GAGCTGAAGC TCGGGCTGGA GCGCGGCGAA ATCGTTCCCT ATTATCAGGT GCAGCTCGAT
GCCCGGACGC GGGAGGTGAT CGGCTTCGAG GCCCTGGCGC GCTGGAAACA TCCGGAGAAG
GGCGTGCTCG CCCCGGGAAT ATTCCTGAAG ATCGCCGACG AGCATGGGCT TGCGGCGGAG
ATCGATGCGG CGATCCTCAA AAACGTTCTT GAAGACCGGC TGTTTTGGCT GTTGCAGGGA
TTTGCGGTTC CGCGCATTGC GGTCAATATC TCGGCGTCGC GGCTTGCCGA TCCGACATTG
CTCGGCAAGC TGAGGAAACT CGACATTCCG CCAGGCGTGA TCGTGTTCGA ACTGGTCGAG
ACTATTTTTC TCGACGACAG CGACGAAAAA CTGCTCGACC ATATTGGCGA TATCAAACAA
ATGGGCATCG ACATCGAGAT CGATGATTTC GGATCCGGCC ATGCCTCGCT CATCGGTCTC
GTCAAGCTGC GGCCGAAGCG GCTGAAGATC GACCGGCAGC TCATTGCCGA AGTCGTCAGT
TCCGCCGAGC AGCGGCGCGT GGTGGGTTCG ATCGTGGAAA TCGCCAAGGC GCTCGACGTC
GAGGTTATCG CCGAGGGCAT CGAGACCGAG GCGCATGCCG TCGTGCTGGC GCAGCTCGGC
TGCGATGGCC TGCAGGGTTA CGCGTTTGGT TATCCCGCAC CGGCGGCCGA GACGGCTCGT
CTTTTCTCGC CCATGGCGAG CGGGATCGAA AAGCAGAAGA CGGCGATCGG CGGAACGGTC
CGGTGA
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| Protein sequence | MEASKAETAL PENRPTRSEQ EFQDLLRRLE LALDASRIGV WEHSIATSGI LWDAQMHRLY
ETGETCREVP AWLWSNAIHP DDREQAEYDF DQAIATRGAY NSQFRIVLPS GEIRHLRSRA
HFYVDAEGLP SFIGAEWDVT ADVLLNAELA GQKMVAEARA LALEESNARI EHVADHDYLT
GLPNRRLLDK RLAELPADRS ITTLGVLHLD LDQFKQINDS HGHAAGDAVL RAAALRITAA
IPANGMVARV GGDEFVIVLV NFSDLAELKL ITDDLQRRLR KKIRFGQEML QSGASIGVSW
SGDRRARSLL AESDLALYQA KKLGRNRVEF FTRQLRRLAE ELKLGLERGE IVPYYQVQLD
ARTREVIGFE ALARWKHPEK GVLAPGIFLK IADEHGLAAE IDAAILKNVL EDRLFWLLQG
FAVPRIAVNI SASRLADPTL LGKLRKLDIP PGVIVFELVE TIFLDDSDEK LLDHIGDIKQ
MGIDIEIDDF GSGHASLIGL VKLRPKRLKI DRQLIAEVVS SAEQRRVVGS IVEIAKALDV
EVIAEGIETE AHAVVLAQLG CDGLQGYAFG YPAPAAETAR LFSPMASGIE KQKTAIGGTV
R
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