Gene Rleg2_3087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_3087 
Symbol 
ID6981832 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011369 
Strand
Start bp3147817 
End bp3148725 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content62% 
IMG OID643397797 
ProductRNA polymerase factor sigma-32 
Protein accessionYP_002282580 
Protein GI209550663 
COG category[K] Transcription 
COG ID[COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) 
TIGRFAM ID[TIGR02392] alternative sigma factor RpoH
[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.341195 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.142268 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCGAA ATACCTTGCC GTCCATTACC GCCGGCGAAG CCGGTCTCAA TCGTTACCTC 
GACGAAATCC GCAAGTTTCC GATGCTCGAG CCGCAGCAGG AATACATGCT CGCCAAGCGT
TATGCCGAGC ATGGCGATCG CGACGCCGCC CACAAGCTCG TCACCAGCCA TCTTCGCCTC
GTCGCAAAGA TCGCGATGGG TTATCGCGGC TATGGCCTGC CGATCGGCGA AGTCGTTTCC
GAGGGCAATG TCGGCCTGAT GCAGGCCGTC AAGAAGTTCG ATGCCGAGCG CGGCTTCCGC
CTTGCCACCT ACGCCATGTG GTGGATCAAG GCCTCGATCC AGGAATATAT TCTGCGTTCT
TGGTCGCTGG TGAAGATGGG CACGACCGCC AACCAGAAGC GCCTGTTCTT CAACCTGCGC
CGGCTGAAAG GCCGCATCCA GGCGATCGAT GACGGCGACC TGAAGCCGGA GCACGTCTCC
GAAATCGCCA CCAAGCTGAA GGTCTCGGAG GAGGAGGTCA TTTCGATGAA CCGCCGCCTG
TCCGGCGACG CCTCGCTGAA CGCGCCGATC AAGGCGGCCG AAGGCGACAG CGGCCAATGG
CAGGATTGGC TGGTGGACGA CCATGACAGC CAGGAAGACG TGCTGATCGA ACAGGACGAG
CTCGATACCC GCCGGCGCAT GCTGGCGAAA GCGATGAGCG TGCTGAACGA GCGCGAACGC
CGCATCTTCG AGGCTCGCCG CCTCGCCGAG GATCCGGTGA CGCTGGAAGA CCTGTCGACA
GAATTCGACA TCAGCCGCGA ACGCGTCCGT CAGATCGAGG TCCGCGCTTT CGAGAAGGTG
CAGGACGCTG TCCGCAAGGA AGCCCAGGAA CGCGCCAAGG CCGTCCGCGT CGTCGAAGCA
ACTGCATAA
 
Protein sequence
MARNTLPSIT AGEAGLNRYL DEIRKFPMLE PQQEYMLAKR YAEHGDRDAA HKLVTSHLRL 
VAKIAMGYRG YGLPIGEVVS EGNVGLMQAV KKFDAERGFR LATYAMWWIK ASIQEYILRS
WSLVKMGTTA NQKRLFFNLR RLKGRIQAID DGDLKPEHVS EIATKLKVSE EEVISMNRRL
SGDASLNAPI KAAEGDSGQW QDWLVDDHDS QEDVLIEQDE LDTRRRMLAK AMSVLNERER
RIFEARRLAE DPVTLEDLST EFDISRERVR QIEVRAFEKV QDAVRKEAQE RAKAVRVVEA
TA