Gene Rleg2_3049 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_3049 
Symbol 
ID6981794 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011369 
Strand
Start bp3110297 
End bp3111160 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content62% 
IMG OID643397759 
Productdiguanylate cyclase 
Protein accessionYP_002282542 
Protein GI209550625 
COG category[T] Signal transduction mechanisms 
COG ID[COG2199] FOG: GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.260561 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAAACT GGATGTCGCT GCAGGCCGAT TTCGGCAATT TTCAATATCG CGGGAACGTC 
TATGTCTTTG CGTTGAAGAT GAGCTTTCTG ACGGTCCTTC TCTCCGGCGT CATCATGGCG
GTGACGATAC CGCCGCTCGG TTTTCTCGGG CTGCTGCCGG AGACGCTCTC GCACGCGATC
GGCTTCGGCG TCATTTTTTC CTGGCTCGTC GGTGGCACGG TTTCCGGCAT GCTGTCGCTG
GCCGCCGGTT TTGCCCTGCA CGAACTGACG CTGTCGCGGG CGGAGTTCGA AAAGCTCAGC
CGCACGGACA CGCTTTCGGG ACTGTTGAAC CGGCGCGCTT TCACAGAGGC GCTCGAGAAC
ACCGAAGGCG ACGCCTCACT TGTTATTTTC GATGTCGACC GCTTCAAGGC GATCAACGAT
CGCTTTGGCC ATGGTTGCGG CGATGCCGTC ATCACCGCGG TCTCGGCCAT GCTCATATCC
GCCTTCGATG AAATGTCCGT CGTCGCAAGG CTGGGCGGGG AGGAGTTCGG CGTCATCATC
TCCGGCGAGC CGCTGGAGGC GCGGATGGAA CGCATCGAAG GTGTCCGGGC CCGAATCGCA
GGCGGCGCCA TCGCAGCCGA GGGGCATGAT ATCCGCATCA CCGTTTCCGG CGGTGTCGCC
GATCTCGCCG CCGGGCGCAA CAAGCAGGCG GTCTATGCGT CGGCAGACCG GGCGCTCTAC
CTCGCCAAGG CGCTCGGGCG CAATCGCGTC GTACACGAGC GGGAAGGCCT GCATCATGCC
TGGCACGGGC TCGCCGATAA TGGCCTCGAG GCCAAGGGCA GGGGAGTTGA GAGCGACAAC
GTGATGCAGG CTTACGGAAT ATAA
 
Protein sequence
MRNWMSLQAD FGNFQYRGNV YVFALKMSFL TVLLSGVIMA VTIPPLGFLG LLPETLSHAI 
GFGVIFSWLV GGTVSGMLSL AAGFALHELT LSRAEFEKLS RTDTLSGLLN RRAFTEALEN
TEGDASLVIF DVDRFKAIND RFGHGCGDAV ITAVSAMLIS AFDEMSVVAR LGGEEFGVII
SGEPLEARME RIEGVRARIA GGAIAAEGHD IRITVSGGVA DLAAGRNKQA VYASADRALY
LAKALGRNRV VHEREGLHHA WHGLADNGLE AKGRGVESDN VMQAYGI