| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_3024 |
|---|
| Symbol | |
|---|
| ID | 6981769 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011369 |
|---|
| Strand | - |
|---|
| Start bp | 3083209 |
|---|
| End bp | 3083766 |
|---|
| Gene Length | 558 bp |
|---|
| Protein Length | 185 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 643397734 |
|---|
| Product | RNA polymerase sigma factor |
|---|
| Protein accession | YP_002282517 |
|---|
| Protein GI | 209550600 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
|---|
| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.023192 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGATA AAGCGCAACC CAGCTTCAAG CGGGAACTGC TGGCGGCCCT CCCAAGTCTC
CGCGCCTTCG CAATTTCGCT CATTGGGCGG CATGATCGTG CCGATGATCT CGTCCAGGAC
ACCATCATGA AGGCCTGGGC CAAACAGGAT CATTTCGAGA TGGGCACCAA TATGAAGGCC
TGGCTCTTCA CGATCCTGCG TAACGAACTC TATAGCCAGA TGCGCAAGAG CGGCCGCGAG
ATCCAGGACA GCGACGGGCT GTTCACGGAA TCGATGGCGA TGCACCCCTC GCAATATGGC
GCCCTCGATC TGCAGGACTT CAAGAAGGCG CTCGACCAGC TGCCGCCGGA TCAGCGCGAG
GCGATCATCC TCGTCGGCGC CTCAGGTTTT TCCTACGAAG AAGCGGCCGA AATCTGCGGC
TGCGCCGTCG GCACCATCAA GAGCCGCGTC AACCGCGCCC GCCAGCGGCT GCAGGAATTG
CTGCAGATAT CAGGCGAGGC CGATTTCGGC CCCGACGCCA CCTCGGCGCC GCTGACGTCG
AAGGCGTTTG CGTTCTGA
|
|---|
| Protein sequence | MEDKAQPSFK RELLAALPSL RAFAISLIGR HDRADDLVQD TIMKAWAKQD HFEMGTNMKA
WLFTILRNEL YSQMRKSGRE IQDSDGLFTE SMAMHPSQYG ALDLQDFKKA LDQLPPDQRE
AIILVGASGF SYEEAAEICG CAVGTIKSRV NRARQRLQEL LQISGEADFG PDATSAPLTS
KAFAF
|
|---|
| |