| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_2978 |
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| Symbol | |
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| ID | 6981723 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011369 |
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| Strand | - |
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| Start bp | 3037835 |
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| End bp | 3039604 |
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| Gene Length | 1770 bp |
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| Protein Length | 589 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643397688 |
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| Product | type I secretion system ATPase |
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| Protein accession | YP_002282471 |
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| Protein GI | 209550554 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4618] ABC-type protease/lipase transport system, ATPase and permease components |
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| TIGRFAM ID | [TIGR01842] type I secretion system ABC transporter, PrtD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTTCAGA GTTCAGCGAC CGATGCCAGT GAGCCGTCCA AAGCCTTGCG GAAGTGCAAG
GGGGGACTTG TCTTCATCGG CATAGCAAGC GCGCTTATCA ATATTCTCTA TCTTACCAGC
TCATTCTTCA TGCTTGAGGT GTATGACCGC GTCATTCCGA GCAAAAGCAT ACCGACGCTG
GCTGCCTTGG CGATACTTGC ATTGGCTCTT TACGCGTTTC AGGGCGCGTT CGAGGTTCTC
CGGAGCAGGA TGCTCGTGCG CGTTGCCGGT GCGCTTGACG AGATGGTGAA CGGACGCGTG
TTCCGGGCGC TCATCAAGGC GCCGCTGAAA GTCAAAATCG GCGGGGACGG GCTTCAGCCG
TTGCGCGACT TCGACCAGAT AAGAACCTTC CTGTCCGGCA TGGGCCCGAC GGCGATGTTC
GATCTGCCGT GGCTTCCCTT CTACATCGTG ATCTGCTTCC TGTTTCATCC GGCGATCGGA
TATATCGCGA TCGGTGGATC GCTGGTTCTT GCCATCCTGA CGTTCTTGAC CAACCAGGGA
ACGCGGACGC TGTCAAAACA GCAATCCGAC GCCGCCAATA TGCGCAATGC CTTTGCGCAG
ACCTCGATCC GCAACTCCGA GGTCATTCAC GCAATGGGCA TGGCGGGCAC CATGGCCGAG
ATCTGGGACC GCAAGAACGA AGAATACCGG CTCATCACCC GGCAGGCGTC GGATGTCGGC
AACGGATATG CGACCCTGTC GAAGATTTTC CGTATTGCCC TGCAATCGGG AACGCTTGCG
ACCGGTGCGA TCCTGGTCAT TCAAGGCCAG GCCTCTTCAG GCATTATCAT CGCGGGCTCT
ATTCTGACAT CGCGCGCTCT GGCGCCTGTG GAAGCGGCGA TCGGGAATTG GCGCGGATTC
GTTTCCGCCC AGCAAAGCTG GGCGCGGCTT GCGAACCTGC TGAAAACCAT TCCAGAAATC
CCGGCACCGC TCGCGCTCGC GGCGCCTTCC AAGCAGGTTA CGGTCGAGGG GCTGGCAAGC
GGGCCGCCGG CGGGCCAGCG CCTGGTTATT TCCGATGTCA GCTTCGGGCT GAGAGCAGGA
AGCGCCCTCG GGGTTATCGG TTACAGCGCT TCGGGCAAGT CGTCGCTGGC GCGGGCAATG
ATGGGCATCT GGCCGACCGT CAGGGGATCC ATTCGTCTCG ATGGCGCAGC ACTCGACCAG
TGGGATGGCG ATGCCCTTGG CCGGCATATC GGTTATCTCC CGCAGGACGT GGAACTGTTC
TCAGGAACCG TCGCGCAGAA TATCTGCCGT TTCGCCAAGG AGATGTCGCC TGAGGCGGTG
GTCGCTGCGG CGCGGGCGGC ACGTGTTCAC GATCTCATTC TTCGTCTGCC GAACGGTTAC
GAAACCGAAA TCGGTGAAGG GGGTGCGGCA CTTTCGGCCG GCCAGAGACA GCGTATCGCG
CTTGCAAGAG CGCTTTACGG CGAGCCCTTC CTCGTCGTGC TCGACGAACC GAACTCTAAC
CTCGATGAGG AAGGCGAGCG GGCGCTGAGC GCCGCGATCA TGAGCGTGCG CGCACGCGGC
GGCATCGTCG TCGTCATCGC GCATCGGTCC GGGGTTCTGG CGGTCTGCGA CTTCGTGCTG
ATGATGCAGG ACGGCCGGAT GATCGCATTC GGTCCGAAGG AAGAAGTTCT GGCACGGGTC
AGCCGGCAGG AACCGGCGGC GCGCACGCCG ATTGCCGATC GCGTGGCTCA GCTCAAGGTC
GTGGTCGACG GCATGAATGC GGCTGAATAG
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| Protein sequence | MFQSSATDAS EPSKALRKCK GGLVFIGIAS ALINILYLTS SFFMLEVYDR VIPSKSIPTL
AALAILALAL YAFQGAFEVL RSRMLVRVAG ALDEMVNGRV FRALIKAPLK VKIGGDGLQP
LRDFDQIRTF LSGMGPTAMF DLPWLPFYIV ICFLFHPAIG YIAIGGSLVL AILTFLTNQG
TRTLSKQQSD AANMRNAFAQ TSIRNSEVIH AMGMAGTMAE IWDRKNEEYR LITRQASDVG
NGYATLSKIF RIALQSGTLA TGAILVIQGQ ASSGIIIAGS ILTSRALAPV EAAIGNWRGF
VSAQQSWARL ANLLKTIPEI PAPLALAAPS KQVTVEGLAS GPPAGQRLVI SDVSFGLRAG
SALGVIGYSA SGKSSLARAM MGIWPTVRGS IRLDGAALDQ WDGDALGRHI GYLPQDVELF
SGTVAQNICR FAKEMSPEAV VAAARAARVH DLILRLPNGY ETEIGEGGAA LSAGQRQRIA
LARALYGEPF LVVLDEPNSN LDEEGERALS AAIMSVRARG GIVVVIAHRS GVLAVCDFVL
MMQDGRMIAF GPKEEVLARV SRQEPAARTP IADRVAQLKV VVDGMNAAE
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