| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_2967 |
|---|
| Symbol | |
|---|
| ID | 6981712 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011369 |
|---|
| Strand | + |
|---|
| Start bp | 3027078 |
|---|
| End bp | 3028580 |
|---|
| Gene Length | 1503 bp |
|---|
| Protein Length | 500 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 643397677 |
|---|
| Product | polysaccharide biosynthesis protein |
|---|
| Protein accession | YP_002282460 |
|---|
| Protein GI | 209550543 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGGAGTG TGACCGACAG GCTTATTCAA GGTAGTGTAT GGCTCAGCTT TTCGCGCGCC
ATCGTCAATG GACTTTCGGC GCTGAGTACC TTCATCTTAG CTTGGTACCT CGCGCCCTCA
GATTTTGGCC TTGTCGCTAT CGCGACGACA ATCCAGATCA TTTTGAGTTC TGTTACCGAC
CTTTCTCTTG GCCAAGCCCT CATTCGTCAC GATTCTCCCA GTGAGGTTCA CTTCAGTGCG
GTATGGACTT TGAGTGTGAC GCGAAGCGCC ATACTTGGTC TGGTATTTGC TGCAGGCGCT
TATCCAATTG CCGAGTTCTA CAACGAGCCG CGGTTAATTG GGGTAATGTT TGCTTTGAGC
TTCAGCCTGT TTATGAGTGG CTTGGCAAAT CCGCGCCGCG TCATGCTCCA GCGCGACCTC
ATATTTTGGC AGGAGTTCGT ACTCAACGTC TCCCAAAAGC TGGTTGGATT CGTTGTGACG
GTGGCAATTG CCGCCATCTA TCAGAGTTAT TGGGCCCTCG TTATCGGCAC GCTTGCTTAT
CAGGTCACCA ATATCATCGT ATCCTACACC GTCTTGCCGT TCTGGCCCCG AATAACCTTT
CGGCATGCAC GAGAGTTGTT TTCATTCTCA CTCTGGCTGA CAGCAGGACA GATCGTTAAC
ACACTCAATT GGCGGGTCGA ATATCTGCTG ATTGGGAAGT GGCTGGGTGC CGCGGAGCTT
GGCCATTATA CCGTTGGCAA CACACTTTCG ACACTGCCGA CGCGTGAAGC CACAGCGCCA
TTGAATCAGA CGATTTACCC AGGCTTTTCC AGAGTGCGCC ATGACCCGGT TCGCCTCACA
GCGGCTTACC AGCGTGCGCA GGCGCTCCTG GCTGCAGTGG CGCTGCCGGC AGGAATTGGC
ATGGCGGTCG TGGCCGACCC TATGATCAGG CTTGCTCTCG GCGAGAAATG GGTCCCCGCC
ATTTTCATTG TGCAGTCGCT GGCTTCAGTT TTTGCCTTGC AGACTCTTGG TTCGCTTGTC
CAAGCACTGG GAATGGCAAA GGGCCAGACC AAATTGCTGT TTATCCGCGA CTCCCAAATG
CTGGTGACTC GTGTCCCCAT CATTATAGTT GGTCTCCTGC TTGCCGGGCT TCCAGGCGTG
ATCTACGCTC GGGTGCTAAC GGGCCTGATT TCGACTGTTG TCAACATGCT TTTAGTAAAG
CGCTTGATCG GCCTCGCATT TTTCCAGCAG CTCGCGGCCA ATTTCCGCGC ACTAGTCAGT
GTCGCTTTGA TGGCCGCCGC GGTCTGGGGG TTGTCGCATG TCTTGAGCAC CCCGACCGAC
AAAGCTGCTT TGACTCTTCA TCTTGCTATT CTGGTTATTA CCGGAGGCGT AATCTATGTC
GGATCGAGCT TTGTCCTTTG GCTCGCCATG AAGCGACCGA ACGGCCCGGA AACCGAAGTT
CAGCGCATCG TCGTCAAGTT CCTGTCAAAA GCCAAGCGTA TTGCCGTCGC AAAGTCGGCC
TAA
|
|---|
| Protein sequence | MRSVTDRLIQ GSVWLSFSRA IVNGLSALST FILAWYLAPS DFGLVAIATT IQIILSSVTD
LSLGQALIRH DSPSEVHFSA VWTLSVTRSA ILGLVFAAGA YPIAEFYNEP RLIGVMFALS
FSLFMSGLAN PRRVMLQRDL IFWQEFVLNV SQKLVGFVVT VAIAAIYQSY WALVIGTLAY
QVTNIIVSYT VLPFWPRITF RHARELFSFS LWLTAGQIVN TLNWRVEYLL IGKWLGAAEL
GHYTVGNTLS TLPTREATAP LNQTIYPGFS RVRHDPVRLT AAYQRAQALL AAVALPAGIG
MAVVADPMIR LALGEKWVPA IFIVQSLASV FALQTLGSLV QALGMAKGQT KLLFIRDSQM
LVTRVPIIIV GLLLAGLPGV IYARVLTGLI STVVNMLLVK RLIGLAFFQQ LAANFRALVS
VALMAAAVWG LSHVLSTPTD KAALTLHLAI LVITGGVIYV GSSFVLWLAM KRPNGPETEV
QRIVVKFLSK AKRIAVAKSA
|
|---|
| |