Gene Rleg2_2962 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_2962 
Symbol 
ID6981707 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011369 
Strand
Start bp3022235 
End bp3023308 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content57% 
IMG OID643397672 
Productglycoside hydrolase family 10 
Protein accessionYP_002282455 
Protein GI209550538 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3693] Beta-1,4-xylanase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0820888 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAGAA GACGTTTCCT CGCCTCGATT CCGCTTGCTC TGTTGTATGC CAATGCGGGC 
GACGTCCTCG CACAGGTGCC TCCGGCGAGA GGGTTGCGCG CCGTTGCCGA CAGCAAGGCA
TTCCGATTCG GATCGGCAAT CGACCTGCAG AACATCAACG ACCCAATCGC CTCCAGGATC
TACACCGACA ACGTCAATTC GATAACGCCG CGAAACGAGC TGAAATGGAA TGCGACAGAA
AAGAGACCGG GTGTATTCAG CTTCAAGAAT GCCGACCTTA TGGTTGCATT CGCACGCAAA
AACAACATGA GGGTTTATGG CCATACTTTG ATCTGGTATC GCGTCCCGGA GTGGGTGTCT
GAGATCACCG ACGCCAAGAC GATTCAGGCG ACGATGAACC GTCATATAAA ACAGGTTGTC
ACTCGCTATA AGAACTCGAT CGACGCTTGG GATGTGGTGA ACGAGCCGTT GGAATATGAT
GCGCCGGATC TGCGGGATTG TGTTTTCCGA CGCCTCCTTG GCGACGACTA TATCCGTATG
AGCTTCGACA TGGCACATCA GGCCAATCCC GGTGCGACGC TGGTGCTCAA CGAAACGCAT
CTGGAGAAAA AATCCGACGT GTTCGAACAG AAGCGCGCCC GCATACTGAA AATCGTCGAG
GACCTCGTCG CCCGGAAAAC GCCGATCGGC GCGGTTGGGC TGCAGGCGCA TTTCCGTCCC
GGCCTCGACC GAATCGATCC GGAAGGAATG GGGCGCTTTT GCGCGGCGCT GAAGGACATG
GGGGTCGGCG TTTTCATCAC CGAACTCGAT GCGTCCTGCC ACTTCCTCAA CCGCGACAAA
GGCTTCACGC CGGCGTCATA CGGCGATATT TTCAGTGACG TGATCACCGT GGCGGCCGAG
CGTGGCGACT TGAAAGGCGT GACGGTATGG GGCATGTCGG AAAAATACGC CGAGCCCGAC
GAGAAGGCGG CCGGTCCCGA CGCGGCTTGC ACGAAGCGCG TTAATCTTTA CGACGAAAAC
AACACGCCGA GAAGTGCGGT TGATGGCATC CGACGGGCAA TAGAGGCGAT GTGA
 
Protein sequence
MNRRRFLASI PLALLYANAG DVLAQVPPAR GLRAVADSKA FRFGSAIDLQ NINDPIASRI 
YTDNVNSITP RNELKWNATE KRPGVFSFKN ADLMVAFARK NNMRVYGHTL IWYRVPEWVS
EITDAKTIQA TMNRHIKQVV TRYKNSIDAW DVVNEPLEYD APDLRDCVFR RLLGDDYIRM
SFDMAHQANP GATLVLNETH LEKKSDVFEQ KRARILKIVE DLVARKTPIG AVGLQAHFRP
GLDRIDPEGM GRFCAALKDM GVGVFITELD ASCHFLNRDK GFTPASYGDI FSDVITVAAE
RGDLKGVTVW GMSEKYAEPD EKAAGPDAAC TKRVNLYDEN NTPRSAVDGI RRAIEAM