| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_2888 |
|---|
| Symbol | |
|---|
| ID | 6981632 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011369 |
|---|
| Strand | - |
|---|
| Start bp | 2937030 |
|---|
| End bp | 2937953 |
|---|
| Gene Length | 924 bp |
|---|
| Protein Length | 307 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 643397598 |
|---|
| Product | urate catabolism protein |
|---|
| Protein accession | YP_002282382 |
|---|
| Protein GI | 209550465 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
|---|
| TIGRFAM ID | [TIGR03212] putative urate catabolism protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.558847 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.0871438 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTATCCG AGACTTATCC GCGCAATCTC GTCGGCTACG GGCGTCAGAC GCCCGATCCG
AAATGGCCTG AAGAGGCACG CGTTGCCGTG CAGTTCGTCA TCAATTACGA GGAAGGTGGC
GAAAGCTCGA TCCTCGACGG TGATCCGGCG TCCGAAAATC TGCTATCGGA AATCGTCGGC
GCGGCTGCCT GGCCGGGACA GCGCAATCTC AACATGGAAT CGATCTACGA ATATGGTTCG
CGCGCCGGTT TCTGGCGGCT CTGGCGGATG TTCACCGATC TCAAGGTGCA GGCGACCGTC
TACGGCGTGA CGCTGGCGAT GGCCCGCAAC CCCGAGGCCG TTGCGGCGAT GAAGGAGGCC
GGCTGGGAAA TCGCCAGCCA CGGTTACCGC TGGCTGGAAT ATAAGGATTT TCCGGAAGAT
CTCGAACGCA AGCACATCCT CGAAGCCGTC CGCCTGCACA CCGAACTCAC CGGCGAGCGG
CCCTACGGCA TGTATCAGGG CAAACCTTCG GACAATACGC TGCGGCTGGT GCAGGAGGAG
GGCGGCTTTC TCTATTCCTC CGATTCTTAT GCCGACGACC TGCCTTACTG GGTGAAGGGC
GTCGACGGGA AACCTTTCCT GATCATTCCC TATACGCTCG AAACCAACGA CATGCGTTTT
GCGACGCCGC AGGGTTTCAA TACCGGCGAT CAGTTCTTCA CCTACCTCAA GGATGCCTTC
GATACGCTCT ATGAGGAAGG CAAGGCGGGC AGCCCGAAGA TGATGTCGGT CGGCCTGCAT
TGCCGTCTCG TCGGGCGCCC CGGCCGGGCG GCAGCGCTGA AGCGCTTCAT CGAATATGTG
CTCAAGCACG ACAAGGTGTG GATTCCGCGC CGCATCGAGA TTGCCGAGCA CTGGCTCAAG
CACCATCAGC CGGACGCGAT CTGA
|
|---|
| Protein sequence | MVSETYPRNL VGYGRQTPDP KWPEEARVAV QFVINYEEGG ESSILDGDPA SENLLSEIVG
AAAWPGQRNL NMESIYEYGS RAGFWRLWRM FTDLKVQATV YGVTLAMARN PEAVAAMKEA
GWEIASHGYR WLEYKDFPED LERKHILEAV RLHTELTGER PYGMYQGKPS DNTLRLVQEE
GGFLYSSDSY ADDLPYWVKG VDGKPFLIIP YTLETNDMRF ATPQGFNTGD QFFTYLKDAF
DTLYEEGKAG SPKMMSVGLH CRLVGRPGRA AALKRFIEYV LKHDKVWIPR RIEIAEHWLK
HHQPDAI
|
|---|
| |