Gene Rleg2_2833 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_2833 
Symbol 
ID6981577 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011369 
Strand
Start bp2882260 
End bp2883906 
Gene Length1647 bp 
Protein Length548 aa 
Translation table11 
GC content61% 
IMG OID643397545 
Productalpha amylase catalytic region 
Protein accessionYP_002282329 
Protein GI209550412 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0366] Glycosidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.518671 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.538121 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATTGA AGGCAGGCGG GAATGCGGAC TGGTGGCGCG GCGCGGTGAT CTACCAGGTC 
TATCCGCGCT CGTTTCAGGA CACCAACAGC GACGGGCTTG GCGACCTCAA GGGGATTACC
CGCCGCCTGC CGCATATCGC TAGTCTCGGT GTCGACGCGA TCTGGCTTTC GCCCTTCTTC
AAGTCGCCGA TGGCCGACAT GGGGTATGAT GTTTCCGATT ATTGCGACGT CGACCCGATC
TTCGGCACGC TCGCCGATTT CGACGAGATG ATGGCGGAGG CGCACAGGCT CGGCATCAAG
GTCGTCATCG ACCAGGTGAT CTCGCACACA TCGGACCGGC ACCCCTGGTT CGTCGAGAGC
CGGACGAGCC GGACCAATGC GAAGGCGGAC TGGTATGTCT GGGCCGATCC GAAGCCGGAT
GGCACGGCGC CGAACAATTG GCTGTCGATT TTCGGCGGGC CGGGCTGGGA GTGGGACGGC
GTGCGCCGGC AATATTACCA GCACAATTTC CTGACCTCGC AGCCGGACCT GAATTTCCAC
AGCAGGGAAG TGCAGGATGC GGTGCTGGAG ACGGTGAAAT TCTGGCTCGA CCGCGGCGTC
GACGGCTTCC GGCTGGATAC CGTCAACTAT TATTTCTGCG ACAAGCAGCT CAGAAGCAAT
CCGCCGCACG AGCCCGATGA GGATGATGCA GGCCTCGATG CGCCCGACAG CAATCCCTAT
GGCATGCAGA ATCATCTCTA TGACAAGACG CAGCCGGAAA ACGTCGATTT CCTCAAACGC
TTCCGGGTGC TGCTCGACCA ATATCAGGAT CGTACCACCG TCGGCGAGGT CGGCGACGGC
GCGCGTTCAC TGAAGACGGT GGCGGCCTAT ACGAGCGGCG GCGACAAGCT GCACATGTGC
TACACCTTCG ACCTGCTGGG ACCGGATTTT ACCGCCGAGC ATATTCGCGG CTGCGTCGAA
GCTTTCCAAA AATCCGTGAC CGATGGCTGG GTCTGTTGGG CTTTTTCAAA CCACGACGTC
ATGCGCCATG TCAGCCGTTT TGCGGTGACG GAGGAAGAGC GGCCCGTCAT CGCCAAACTG
GCGATCTCGG TGCTGTCGGC GCTGCGCGGT TCGATCTGCC TCTATCAGGG CGAGGAGCTC
GGGCTGCCGG AGGCGGAGCT TGCCTTCGAA GATCTGCGCG ACCCTTACGG CATCCGCTTC
TGGCCGGCCT TCAAAGGCCG CGACGGATGC CGCACGCCGA TGCCCTGGGA GGCGGGCAAG
GCACATGCGG GCTTTACTTC AGCCGAAAAG AGCTGGCTGC CGGTGCCTTA CGAGCAGGCG
GCACTTTCCG TGGATACGCA GGAGGGAAGC GACAGCTCGG TGCTGCATCA CTATCGCAAG
ACGCTCGCAT TCCGGAAGAG CCATGCGGCG CTAGTCGACG GCGAAATGAC CTTCATCGCC
ACCAATCAGG ATCTGCTCGT CTTCACCCGG GAAAAGGACG GGGGAAAACT GCTCTTCGTT
TTCAACCTGA CGCGCAAACC GGCGGAATTC CGTCTGCCTG AAGGCATCGT GTTGGGCGAA
CCGCTCGAGA TGCCCGGGTT CGAGGCGGTG TCGGTTTCGG GGCTGGTGAA GCTTGCGGCG
CTGGATGGGT TCTGTGCGCG GATTTGA
 
Protein sequence
MALKAGGNAD WWRGAVIYQV YPRSFQDTNS DGLGDLKGIT RRLPHIASLG VDAIWLSPFF 
KSPMADMGYD VSDYCDVDPI FGTLADFDEM MAEAHRLGIK VVIDQVISHT SDRHPWFVES
RTSRTNAKAD WYVWADPKPD GTAPNNWLSI FGGPGWEWDG VRRQYYQHNF LTSQPDLNFH
SREVQDAVLE TVKFWLDRGV DGFRLDTVNY YFCDKQLRSN PPHEPDEDDA GLDAPDSNPY
GMQNHLYDKT QPENVDFLKR FRVLLDQYQD RTTVGEVGDG ARSLKTVAAY TSGGDKLHMC
YTFDLLGPDF TAEHIRGCVE AFQKSVTDGW VCWAFSNHDV MRHVSRFAVT EEERPVIAKL
AISVLSALRG SICLYQGEEL GLPEAELAFE DLRDPYGIRF WPAFKGRDGC RTPMPWEAGK
AHAGFTSAEK SWLPVPYEQA ALSVDTQEGS DSSVLHHYRK TLAFRKSHAA LVDGEMTFIA
TNQDLLVFTR EKDGGKLLFV FNLTRKPAEF RLPEGIVLGE PLEMPGFEAV SVSGLVKLAA
LDGFCARI