Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg2_2833 |
Symbol | |
ID | 6981577 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
Kingdom | Bacteria |
Replicon accession | NC_011369 |
Strand | - |
Start bp | 2882260 |
End bp | 2883906 |
Gene Length | 1647 bp |
Protein Length | 548 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 643397545 |
Product | alpha amylase catalytic region |
Protein accession | YP_002282329 |
Protein GI | 209550412 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0366] Glycosidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.518671 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.538121 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCATTGA AGGCAGGCGG GAATGCGGAC TGGTGGCGCG GCGCGGTGAT CTACCAGGTC TATCCGCGCT CGTTTCAGGA CACCAACAGC GACGGGCTTG GCGACCTCAA GGGGATTACC CGCCGCCTGC CGCATATCGC TAGTCTCGGT GTCGACGCGA TCTGGCTTTC GCCCTTCTTC AAGTCGCCGA TGGCCGACAT GGGGTATGAT GTTTCCGATT ATTGCGACGT CGACCCGATC TTCGGCACGC TCGCCGATTT CGACGAGATG ATGGCGGAGG CGCACAGGCT CGGCATCAAG GTCGTCATCG ACCAGGTGAT CTCGCACACA TCGGACCGGC ACCCCTGGTT CGTCGAGAGC CGGACGAGCC GGACCAATGC GAAGGCGGAC TGGTATGTCT GGGCCGATCC GAAGCCGGAT GGCACGGCGC CGAACAATTG GCTGTCGATT TTCGGCGGGC CGGGCTGGGA GTGGGACGGC GTGCGCCGGC AATATTACCA GCACAATTTC CTGACCTCGC AGCCGGACCT GAATTTCCAC AGCAGGGAAG TGCAGGATGC GGTGCTGGAG ACGGTGAAAT TCTGGCTCGA CCGCGGCGTC GACGGCTTCC GGCTGGATAC CGTCAACTAT TATTTCTGCG ACAAGCAGCT CAGAAGCAAT CCGCCGCACG AGCCCGATGA GGATGATGCA GGCCTCGATG CGCCCGACAG CAATCCCTAT GGCATGCAGA ATCATCTCTA TGACAAGACG CAGCCGGAAA ACGTCGATTT CCTCAAACGC TTCCGGGTGC TGCTCGACCA ATATCAGGAT CGTACCACCG TCGGCGAGGT CGGCGACGGC GCGCGTTCAC TGAAGACGGT GGCGGCCTAT ACGAGCGGCG GCGACAAGCT GCACATGTGC TACACCTTCG ACCTGCTGGG ACCGGATTTT ACCGCCGAGC ATATTCGCGG CTGCGTCGAA GCTTTCCAAA AATCCGTGAC CGATGGCTGG GTCTGTTGGG CTTTTTCAAA CCACGACGTC ATGCGCCATG TCAGCCGTTT TGCGGTGACG GAGGAAGAGC GGCCCGTCAT CGCCAAACTG GCGATCTCGG TGCTGTCGGC GCTGCGCGGT TCGATCTGCC TCTATCAGGG CGAGGAGCTC GGGCTGCCGG AGGCGGAGCT TGCCTTCGAA GATCTGCGCG ACCCTTACGG CATCCGCTTC TGGCCGGCCT TCAAAGGCCG CGACGGATGC CGCACGCCGA TGCCCTGGGA GGCGGGCAAG GCACATGCGG GCTTTACTTC AGCCGAAAAG AGCTGGCTGC CGGTGCCTTA CGAGCAGGCG GCACTTTCCG TGGATACGCA GGAGGGAAGC GACAGCTCGG TGCTGCATCA CTATCGCAAG ACGCTCGCAT TCCGGAAGAG CCATGCGGCG CTAGTCGACG GCGAAATGAC CTTCATCGCC ACCAATCAGG ATCTGCTCGT CTTCACCCGG GAAAAGGACG GGGGAAAACT GCTCTTCGTT TTCAACCTGA CGCGCAAACC GGCGGAATTC CGTCTGCCTG AAGGCATCGT GTTGGGCGAA CCGCTCGAGA TGCCCGGGTT CGAGGCGGTG TCGGTTTCGG GGCTGGTGAA GCTTGCGGCG CTGGATGGGT TCTGTGCGCG GATTTGA
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Protein sequence | MALKAGGNAD WWRGAVIYQV YPRSFQDTNS DGLGDLKGIT RRLPHIASLG VDAIWLSPFF KSPMADMGYD VSDYCDVDPI FGTLADFDEM MAEAHRLGIK VVIDQVISHT SDRHPWFVES RTSRTNAKAD WYVWADPKPD GTAPNNWLSI FGGPGWEWDG VRRQYYQHNF LTSQPDLNFH SREVQDAVLE TVKFWLDRGV DGFRLDTVNY YFCDKQLRSN PPHEPDEDDA GLDAPDSNPY GMQNHLYDKT QPENVDFLKR FRVLLDQYQD RTTVGEVGDG ARSLKTVAAY TSGGDKLHMC YTFDLLGPDF TAEHIRGCVE AFQKSVTDGW VCWAFSNHDV MRHVSRFAVT EEERPVIAKL AISVLSALRG SICLYQGEEL GLPEAELAFE DLRDPYGIRF WPAFKGRDGC RTPMPWEAGK AHAGFTSAEK SWLPVPYEQA ALSVDTQEGS DSSVLHHYRK TLAFRKSHAA LVDGEMTFIA TNQDLLVFTR EKDGGKLLFV FNLTRKPAEF RLPEGIVLGE PLEMPGFEAV SVSGLVKLAA LDGFCARI
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