| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_2766 |
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| Symbol | |
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| ID | 6981510 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011369 |
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| Strand | + |
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| Start bp | 2810587 |
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| End bp | 2812935 |
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| Gene Length | 2349 bp |
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| Protein Length | 782 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643397478 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_002282262 |
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| Protein GI | 209550345 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.793665 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAATT CCGTTGAGAA CAGATTTTTT GGAATTGTTT GCGGAGCGCT GCTCGTTTTT
GTCGCTCCCC TCTTTGTTCT CTTCCTTTTT CTTTCCTCGG AACGGGCCGA CAAGGAAATA
CGCGATCACA TTTCCGTTCT CCTTGTCGCC AATGCCCAGG CGCTGGCAAA GCCACTCTGG
GACCTCGATG AGGAGAGTGT CACCCAGATC AGCGCGACGG TCGTTTCCCA GGGCGCCATC
GTCAAGGTCG AGGTGCGTGA TCAGTCGGGC CAGCTCGACA TCAGTCAGTC CACCATTCCG
CGCTCCTTCG ACGGCAAGCT CGTGCAGGTG TCACGCGCCA TCATCTACAA CACGGTCGAC
GGTCCGAAGA ACCTCGGCAG CATCAGCGTC TATTATCCCG CGCTCGGTCT GTTTTCCGGC
CTGAAGCAGG AAGAGGTCGT CTTCATCTCG ATCTTCATCT TCGCGGTTCT GGCGGTTTTC
GGCACCGCGC TGATCGGCAA CCGGTTCTTC GTCATCCAGC CGCTGATGCG GCTGACGGCC
GCGATCGAGG CCACCCGGCA GCTCGGCTCC CGCCACCATG TCGACTGGCA GTCGAACGAC
GAGATGGGAC GGCTTGCCCG CAGCTTCAAC GAGATGCAGA CAAAGCTCGA AAGCGAGGAG
AAGGAGCTGA AGTTCGCCCA TCGCCGCGCC ACCGACATCT ATAATCTGAC GCCCGCCATG
CTTTTTTCGC TCGACGAGGA AGACCGTATC ACCGCCGTCA GCGATTACTG GCTGCTTGCC
ACAGGCTATA ACCGCGCCGC CGTCATCGGC CGCAACTTCG CCGATCTCGT GACATCGACC
ACCCGCGACA AGTTCAAGCG CCGCCAGGCG GAAAGCGGCA TTGCTGTCAC CGTCAAGTTC
GTCTGCCTGG ACGGCCGCAC CATGGACGTC CTCATCATGG AGTCGGAGGC GGAAGCCGGC
GCTCACGACC GCCTCTCGCT GTCGGTCATG ACCGATGTGA CCGAACTCAA GGCATCCGAG
GACCGCAACC ACCGCCAGGC GATCACCGAT CACCTGACCG GGTTGCTCAA TCGCCAGGGC
TTCGAAGCCG TCCTCGACAA CAAGATCGCC GCCGCCGACG CGGCCGGCCA GGAGCTCGCC
TGCCTCTTCG TCGATCTCGA TCGCTTCAAG TGGATCAACG ACAATATGGG CCATGCCGCC
GGCGACATGG CGCTGATCGA GCTCGTCGAG CGCCTGAAGA CCTATCTCGC TCCCTCCGAT
GAGGCGGCCC GTCTCGGCGG CGACGAATTT GCCATCCTGC TGCCGGCGAA GGATGCCGAA
AAACGCGCCA GGATGATGTG CGAGCAGATC GCCTCGATCT TCGAAACGCC GTTTGCCCCC
GACATGCATC TGAGTGCTTC CGTCGGCATC GCCATTTATC CGCATCATGC CGCAACCGCC
GCCGAACTGC TGCAGAAATC GGATCTGGCA ATGTATGCCA AGAAACGCGA CGGCAAGAAT
GGCGCGCAGC TTTTCGACAA CGCCATGCTC GACCGTGCCC GCAGCCGCGC CGAGATCGAG
GCCAATATCG AATCCGGCCT CGTCGACAAC TGGTTCGAGG CCTTCCTGCA GCCGATCGTC
AATCTGAACG GCCGCGGTAT TGCCGGTTTC GAAGCCCTGA TGCGCCTCAA CCATCCGCAG
AAAGGCTTGA TGCCGCCGGC CGAGATCATC AGCGTTGCCG AGGAGACAGG AAAAATCGTC
CGCGTCGGCA ATGTCATCAT GGAAAAGGCG ATCGCCAATC TCGCGAAGAT CTCCCGCATA
TCCGGCATGC AGGATAGCTA TCTCGCCATC AACTTCTCGC CCCTGCAGTT CGAGCCGGCG
CTGCCGGCCC GGCTTGCCGC CATCGTCGGT CGCCATGGCA TCCATCCAGA GCGCATTGTT
GTCGAGATCA CCGAAGCCGT GCTGATGCAC GACAATCCGC AGATCCGCAT GATCGTCACC
GAGCTTCGCC GCTTCGGTTG CCGTATCGCG CTCGATGATT TCGGCACCGG CTATTCGTCA
CTGAGCTACC TCAACCGCTT TCCTGTCGAC ATCATCAAGA TCGACCAGTC CTTCACCCGC
GCGATCAACG ATGGCGACGA TGACGTGCGC CAGAAGAGCC GCATGCTGAT CGAAGGCATT
ACCACGCTCT CTCACAAGAT GAACTGCACC GTCATCGCCG AGGGTATCGA GACCGAAGAG
GAATGCCGCA CGCTCCACCA GATGGGGCTT GATTATGGCC AGGGTTACCT CTTCCATCGT
CCGAAACACG CAGCCGTACT CATCGAGGAA CTGATGGCCT CGGAAGCGGC CGTCGCACGC
GCCTCATGA
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| Protein sequence | MNNSVENRFF GIVCGALLVF VAPLFVLFLF LSSERADKEI RDHISVLLVA NAQALAKPLW
DLDEESVTQI SATVVSQGAI VKVEVRDQSG QLDISQSTIP RSFDGKLVQV SRAIIYNTVD
GPKNLGSISV YYPALGLFSG LKQEEVVFIS IFIFAVLAVF GTALIGNRFF VIQPLMRLTA
AIEATRQLGS RHHVDWQSND EMGRLARSFN EMQTKLESEE KELKFAHRRA TDIYNLTPAM
LFSLDEEDRI TAVSDYWLLA TGYNRAAVIG RNFADLVTST TRDKFKRRQA ESGIAVTVKF
VCLDGRTMDV LIMESEAEAG AHDRLSLSVM TDVTELKASE DRNHRQAITD HLTGLLNRQG
FEAVLDNKIA AADAAGQELA CLFVDLDRFK WINDNMGHAA GDMALIELVE RLKTYLAPSD
EAARLGGDEF AILLPAKDAE KRARMMCEQI ASIFETPFAP DMHLSASVGI AIYPHHAATA
AELLQKSDLA MYAKKRDGKN GAQLFDNAML DRARSRAEIE ANIESGLVDN WFEAFLQPIV
NLNGRGIAGF EALMRLNHPQ KGLMPPAEII SVAEETGKIV RVGNVIMEKA IANLAKISRI
SGMQDSYLAI NFSPLQFEPA LPARLAAIVG RHGIHPERIV VEITEAVLMH DNPQIRMIVT
ELRRFGCRIA LDDFGTGYSS LSYLNRFPVD IIKIDQSFTR AINDGDDDVR QKSRMLIEGI
TTLSHKMNCT VIAEGIETEE ECRTLHQMGL DYGQGYLFHR PKHAAVLIEE LMASEAAVAR
AS
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