Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg2_2739 |
Symbol | |
ID | 6981483 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
Kingdom | Bacteria |
Replicon accession | NC_011369 |
Strand | + |
Start bp | 2787313 |
End bp | 2788032 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 643397452 |
Product | sortase family protein |
Protein accession | YP_002282236 |
Protein GI | 209550319 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3764] Sortase (surface protein transpeptidase) |
TIGRFAM ID | [TIGR01076] LPXTG-site transpeptidase (sortase) family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.686756 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCTCTA GGCTCTCAGC AAGCCGGAGC GAGGAAGCGG TCGAATTCGA GCCGCTTCCG ACCTATCTGG AACTCGCCAT GGCCGCCGCC ACGGCCCACG ACAGGCCCAA GGTGCGCCAA AGGAGAGTTT TTTTCCTCTG GCGTCTTTCC CCGATCGAAA AAGCGATCGC CGTCGCCATC GCCGGCCTTG CCCTTTATGG CTTGGCGCTG ATCGGCGACG GCTTCCTGCT GAAGGCGAAG GCGGAGCTCT CGCAGATCCT GCTGAAACGC GCCTTCGCCG CCGAACTCAA GGGCGAGAAG ACAAAACCCT GGCCCTGGGC GGATTTCACC ACGGAGGCCA AGGTGCGCGC ACCGCGCCTC GGCAAGGAGG CGATCGTGCT CTCCGGCGCC TCCGGCGAAG CCCTCGCCTT CGGCCCGGCC TGGCTTACCG ATACGCCGCA GCCCGGCGAG CAAGGCACCT CGGTGATCGC CGCTCATCGC GACACGCATT TCCGCTGGCT GCAATATGTA AAACCCGGCG ATACGATCGA GGTCACCCGC CGTGACGGCA AACTATTGAC CTTCAAGGCC GGCGAAGGCC GCATCGCCCC ATGGGATGCC AGCGGCATCG ACCCTTCCTC CAACGGCCGC CGCCTGGTGC TGACCACCTG CTGGCCCTTC GATGCGACCG AACGCGGGCC GCTACGCTAC ATCCTCGAGG CCGAACTGGT CGACGGGTAG
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Protein sequence | MVSRLSASRS EEAVEFEPLP TYLELAMAAA TAHDRPKVRQ RRVFFLWRLS PIEKAIAVAI AGLALYGLAL IGDGFLLKAK AELSQILLKR AFAAELKGEK TKPWPWADFT TEAKVRAPRL GKEAIVLSGA SGEALAFGPA WLTDTPQPGE QGTSVIAAHR DTHFRWLQYV KPGDTIEVTR RDGKLLTFKA GEGRIAPWDA SGIDPSSNGR RLVLTTCWPF DATERGPLRY ILEAELVDG
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