| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_2685 |
|---|
| Symbol | |
|---|
| ID | 6981429 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011369 |
|---|
| Strand | - |
|---|
| Start bp | 2725778 |
|---|
| End bp | 2726998 |
|---|
| Gene Length | 1221 bp |
|---|
| Protein Length | 406 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 643397398 |
|---|
| Product | major facilitator superfamily MFS_1 |
|---|
| Protein accession | YP_002282182 |
|---|
| Protein GI | 209550265 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.188987 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACATAT CCCAAGGCCC GCGGAGCGTT CTTCGCCACC CCGGCTATCT GAACTTCGCT
GCCTCCCGCG TCTTTTCCTC GCTTGCCTTC CAGTCCATCG GCATCGCCAT GGGCTGGATG
ATCTATGATC AGACGCACAG CGCCTTTGCG CTCGGCCTCG TCGGCCTCTG CCAGTTCCTG
CCGATGGCGG TGCTGACCTT TGTCGTCGGC CATGTCGCCG ACCGGTTCGA CCGGCGGCGT
ATCGGCCTCA TCTGCCAGCT GATCGAGGCG GTGACGGCGC TGGTGCTGGC GGTTGCCACC
TGGCAGCAAT GGCTGACGCC TTCAGGCATC CTTGTCGCCG TCACGGTGCT TGGCGCCGTT
GTCGCCTTCG AGCGGCCGAC CATGGCGGCT CTGCTGCCGA ACATCGTGCC GGCTTCGATG
CTGCAGAAGG CGGTCGCCAC CTCCACCTCG CTGATGCAGA CGGCGCTGAT CATCGGCCCC
TCGCTCGGCG GCTTGCTCTA CGGCCTCCAC CCGGTGGCGC CCTTTGCCGT GTCGGCGCTG
CTCTTTGCCG TTGCAAGCTT CAACGTCATC TCGATCCGCA TGCAGTGGGC GCCTTCCAAA
CGCGAGCCGG TGACGCTCGC CTCGGTCTTT GCCGGCGTCT CCTTCATCCG CAGCCGGCCG
GTGATGCTCG GCACGATCTC GCTCGATCTC TTCGCGGTGC TGCTCGGCGG CGCCACGGCA
CTGCTGCCGA TGTTTGCCCG CGATATCCTG CATGCCGGTC CCTGGGAGCT CGGCCTTTTG
CGCGCCGCAC CGGCGATCGG CGCGCTTGCC ATGTCGATCG TGCTCGCCCG CCGGCCGCTC
GAGAGCAATG TCGGGCGCAA GATGCTTGCT GCCGTCGCCG TGTTCGGCCT CGCCACCATC
GTCTTTTCGC TGTCCACCAA CATCACGCTT TCGGTCGCTG CCCTGCTTGT TGTCGGCGCG
TCGGATACGG TCAGCGTCGT CGTGCGCAGT TCGCTGGTGC AGCTTCTGAC GCCGGATGAG
ATGCGCGGCC GCGTCAGCGC GGTCAACTCG CTGTTCATCG GCACCTCCAA CCAGCTCGGC
GAATTCGAAT CCGGCATGAT GGCGGCAGCC CTCGGGCCGG TCGCCACCGG CATCGTCGGC
GGGCTCGGCA CGATCATCGT CGTGCTCCTG TGGATGAGGC TCTTCCCCGA TCTTACCAAG
GTCAAGACGC TGCAGGGCTG A
|
|---|
| Protein sequence | MDISQGPRSV LRHPGYLNFA ASRVFSSLAF QSIGIAMGWM IYDQTHSAFA LGLVGLCQFL
PMAVLTFVVG HVADRFDRRR IGLICQLIEA VTALVLAVAT WQQWLTPSGI LVAVTVLGAV
VAFERPTMAA LLPNIVPASM LQKAVATSTS LMQTALIIGP SLGGLLYGLH PVAPFAVSAL
LFAVASFNVI SIRMQWAPSK REPVTLASVF AGVSFIRSRP VMLGTISLDL FAVLLGGATA
LLPMFARDIL HAGPWELGLL RAAPAIGALA MSIVLARRPL ESNVGRKMLA AVAVFGLATI
VFSLSTNITL SVAALLVVGA SDTVSVVVRS SLVQLLTPDE MRGRVSAVNS LFIGTSNQLG
EFESGMMAAA LGPVATGIVG GLGTIIVVLL WMRLFPDLTK VKTLQG
|
|---|
| |