| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_2657 |
|---|
| Symbol | |
|---|
| ID | 6981400 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011369 |
|---|
| Strand | - |
|---|
| Start bp | 2705173 |
|---|
| End bp | 2706078 |
|---|
| Gene Length | 906 bp |
|---|
| Protein Length | 301 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 643397369 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_002282154 |
|---|
| Protein GI | 209550237 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.364659 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAGCA TCGCAGCAGA CACGGAGGAA GGGCGGCAGG CCGGGCGCAG ACTGAGCCTC
TCCCCCTCGG CCATCTCCTA TCTCCAGGCG ACGCCGCTGA TCGCCATTCT CGGCTTCTTC
TTCCTGCTGC CGATCGCCAT GATCGCTGTC GTCAGTTTCT GGGATTATGA TTTCGCCGGC
CTCTACCCCG ATTTCCTCAC CATGAACTAC ACCGATACGC TCGGTTCGTG GGTGACGTGG
AAGACCTATC TCAACACGTT GAAATTCACC GCGATCGTCT GGGCGCTGAC GCTTCTCATC
GGTTTCTGGG TCGCCTATTT CCTGGCCTTC CACATCCGCA AGACCTCGAC GCAGATGATC
CTCTTTCTCG TCTGCACCGT GCCGTTCATG ACCTCGAACA TCATCCGCAT GATCTCGTGG
ATCCCGGTGC TCGGGCGCAA CGGCCTCGTC AATTCGACGC TGATCGAGTT GGGCATCATC
CCGCAGCCGA TCGAATGGCT GCTCTATTCC GATTTCGCCG TCGTGCTCGC CATGGTGCAT
CTCTATACGC TGTTCATGGT GACGCCGATC TTCAACACGC TGATGCGCAT CGATCGGTCG
CTGTTCGAGG CGGCGCGCGA TGCCGGCGCC TCCGGCTGGC AGGTGCTGTG GAATGTCGTC
ATTCCGCTGG CAAAACCCGG CATGGCGATC GGCACGATCT TCGTCGTCAC CCTCGTCATG
GCCGATTTCT CGACGGTGCA GGTGATGTCC GGCGGCCAGA GCGCCTCGGT GGCGCTGATG
ATGAAGAACC AGATGTCGCT GCTGCAATAT CCGGCGGCCG CCGCCAACGC CGTGGTGCTG
CTGGCCGTCG TGCTGCTGAT GGTCGCGGCC ATTCTGCGCG TCGTCGACAT CCGCAAGGAA
CTTTGA
|
|---|
| Protein sequence | MASIAADTEE GRQAGRRLSL SPSAISYLQA TPLIAILGFF FLLPIAMIAV VSFWDYDFAG
LYPDFLTMNY TDTLGSWVTW KTYLNTLKFT AIVWALTLLI GFWVAYFLAF HIRKTSTQMI
LFLVCTVPFM TSNIIRMISW IPVLGRNGLV NSTLIELGII PQPIEWLLYS DFAVVLAMVH
LYTLFMVTPI FNTLMRIDRS LFEAARDAGA SGWQVLWNVV IPLAKPGMAI GTIFVVTLVM
ADFSTVQVMS GGQSASVALM MKNQMSLLQY PAAAANAVVL LAVVLLMVAA ILRVVDIRKE
L
|
|---|
| |