| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_2598 |
|---|
| Symbol | |
|---|
| ID | 6981340 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011369 |
|---|
| Strand | - |
|---|
| Start bp | 2638613 |
|---|
| End bp | 2640046 |
|---|
| Gene Length | 1434 bp |
|---|
| Protein Length | 477 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 643397310 |
|---|
| Product | UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase |
|---|
| Protein accession | YP_002282095 |
|---|
| Protein GI | 209550178 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0770] UDP-N-acetylmuramyl pentapeptide synthase |
|---|
| TIGRFAM ID | [TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.211888 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAGCTGGC TCTGGACGAC CGAAGATATG ATCGCGGCGA TGGCGGGGCG CCCCTTCGGC
ACTCTGCCCG AAGGCATCAC CGGCATTTCC ATCGACAGCC GCTCGATTGC TCCAGGCGAG
GCCTTCTTCG CGATCAAGGG CGACCGTGTC GACGGTCACG ACTACGCATC GATGGCGATG
GCGAACGGCG CCTCCCTTCT CGTCGTCAGT GAGGCGAGGC TTCCCGCCAT GGGCCGCCTG
ACGGTGCCGA TGATCGTCGT GGAAGACGTG CTCGCCGCAC TCGGCCGGCT CGGCCTTGCC
TCGCGCCAGC GCTCCAAGGC CCGGATCATC GCGGTGACGG GATCTGTCGG AAAGACGACC
ACCAAGGAAA TGCTGCGGCA CGTGCTGTCG CCCTCCGGCA AGGTGCATGC CTCCGTCGCC
TCCTTCAACA ATCATTGGGG CGTGCCGCTG ACGCTGGCGC GCATGCCTGA CGATACGGAT
TACGGTGTCT TCGAAGTCGG CATGAACCAT CCCGGCGAAA TCCGGCCGCT GGTCGAGATG
ATCCGTCCCC ATGTCGCCAT CATCACGACC ATCGCGCCGG CCCATCTCGG TAATTTCAAG
AACATCAAGG AGATCGCCGC CGCCAAAGCG GAGATCTTCG AAGGGCTGGA ACCGGGCGGC
CATGTCGTGC TCAACCGCGA CAATGACCAG TTCAACTTCC TCGACCGAAC CGCACAGTCG
CTTGGCATCG AGCATATTCA TTCCTTCGGC CAGCATGCCA AGGCCGAATT CCGCCTCGCC
GAATTCAACG GCGCAGATGA GAATTCGACG CTGTGGCTGA CGATCGGCGG TGAGACGCTG
GAAGTCGCGA TCGGCGCGCC CGGCCGCCAT ATCGCCGAGA ATGCGCTTGC AGCGCTCGGG
GTCGTCAGGA TCGTCGGCGC CGACATGGAA AAGGCGATCG CAGCGCTGGC GACGCTGAAG
CCGGAAAAGG GCAGGGGCAA GCGCCACCGG CTTTCCATCG GCAGCGGCAG CTTCACGCTG
ATCGACGAAA GCTACAACGC CAATCCGGCT TCGATGCGGG CGGCGATCGC ACTGCTGGCG
GCCTCCGAGC CGACCAGTCG CGGACGCCGT ATTGCCGTGC TGGGCGACAT GCTTGAAATG
GGCGAGTATG CGCAGAAGGT CCATACCGAT CTCGTAGTGC CGCTGCTTGC AGCCGGCATC
GAACATGTCT GGCTTGCCGG CGCAGAGATG GCTGCGCTCA AGGAATCACT GCCGGAAAGC
GTCCATGTCG AATATCGCGA GAACACCGGC GAATTGACGG ATTATGTATT GAACTCGGTC
GCGCCAGGCG ACGTGTTGAT GGTGAAATCG TCTCTGGGCA TCGGTTTCGG CAAGATCGTT
GCCGCGCTCC TTGACAAGTT CCCGCCATTT TCCGACACGC AACGCGAATT TTGA
|
|---|
| Protein sequence | MSWLWTTEDM IAAMAGRPFG TLPEGITGIS IDSRSIAPGE AFFAIKGDRV DGHDYASMAM
ANGASLLVVS EARLPAMGRL TVPMIVVEDV LAALGRLGLA SRQRSKARII AVTGSVGKTT
TKEMLRHVLS PSGKVHASVA SFNNHWGVPL TLARMPDDTD YGVFEVGMNH PGEIRPLVEM
IRPHVAIITT IAPAHLGNFK NIKEIAAAKA EIFEGLEPGG HVVLNRDNDQ FNFLDRTAQS
LGIEHIHSFG QHAKAEFRLA EFNGADENST LWLTIGGETL EVAIGAPGRH IAENALAALG
VVRIVGADME KAIAALATLK PEKGRGKRHR LSIGSGSFTL IDESYNANPA SMRAAIALLA
ASEPTSRGRR IAVLGDMLEM GEYAQKVHTD LVVPLLAAGI EHVWLAGAEM AALKESLPES
VHVEYRENTG ELTDYVLNSV APGDVLMVKS SLGIGFGKIV AALLDKFPPF SDTQREF
|
|---|
| |