| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_2596 |
|---|
| Symbol | murD |
|---|
| ID | 6981338 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011369 |
|---|
| Strand | - |
|---|
| Start bp | 2636070 |
|---|
| End bp | 2637482 |
|---|
| Gene Length | 1413 bp |
|---|
| Protein Length | 470 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 643397308 |
|---|
| Product | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase |
|---|
| Protein accession | YP_002282093 |
|---|
| Protein GI | 209550176 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase |
|---|
| TIGRFAM ID | [TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.34981 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCCCGG TCACGACGCT CAAGGACAGG AAGGTCGCGC TCTTCGGGCT CGGCGGCTCG
GGCCTTGCCA CCGCCCGGGC GCTGGTTTCG GGCGGCGCCG AGGTGACCGC CTGGGACGAC
AATCCCGACA GCGTCGCCAA GGCTTCCGCC GAAGGCATCC GCACCGAGGA CCTGCACACC
ATCGACTGGA GCCAGCAGGC GCTGTTCGTG CTCTCGCCCG GCGTGCCGCT CACCCATCCG
AAGCCGCACT GGACCGTCGA TCTTGCGCGC GCCGCCGGTG TCGATATCGT CGGCGATGTC
GAGCTCTTCG TGCGCGAGCG CCGCGCCCAT GCGCCGGATT GCCCGTTCAT CGCCATCACG
GGCACTAACG GCAAATCGAC GACGACGGCG CTGATTGCCC ATATCCTGAA ATCCGCAGGC
TACGATACGC AGCTCGGCGG CAATATCGGC ACCGCGGTTC TGACGCTCGA TCCGCCGAAG
GCCGGGCGTT ATTACGTCGT CGAATGCTCC TCCTACCAGA TCGATCTGGC GCCGACGCTG
AACCCTTCCG CCGGCATCCT GCTCAACCTG ACGCCCGATC ATCTCGACCG TCACGGCACG
ATGCAGCATT ACGCCGATGT CAAGGAACGG CTGGTTGCCG GCAGCGATGT GGCAATCGTC
GGCGTCGACG ACAGCCATTC GGCGCTGATT GCCGACCGCG TCGAGCGGGC GGATGTCAAG
GTGGTGCGCA TTTCGCGCCG CAGCGTGGTG GCATCAGGCA TTTATGCCGA GGGCAGCAGG
CTCATTCAGG CCGCCGGCGG CGCCATGCTG CCCTTCGCCG ATCTCGATGG TATCCAGACG
CTGCGCGGCA GCCATAATGC GCAGAACGCC GCCGCAGCTG TCGCCGCCTG CCTTGCCGTC
GGTGTTTCCG CCGACGACAT CCGCGCCGGC CTTGCCTCGT TCCCCGGCCT CAAGCACCGC
ATGCAGCCGG TGGGGCAGCG AGGCCGCGTC GTTTTCGTCA ATGATTCCAA GGCGACCAAT
GCCGATGCTG CGGCACCGGC GCTTTCGAGC TATGATCGCA TCTACTGGAT TGCCGGTGGC
CTGCCAAAGG CCGGCGGCAT CACCACGCTC GCTCCCTATT TTCCACGCAT CGCCAAGGCC
TATCTGATCG GCGAGGCGGC GGCGGAATTT GCAGCGACGC TCGGCGAGGC CGTGCCTTAC
GAGATCTCGG GCACGCTGGA GCGCGCGGTC GTGCATGCGG CGGCCGATGC CGAGCGCGAC
GAGGCCGCCG CTTCGGCCGT CATGTTATCC CCGGCTTGCG CAAGCTTCGA TCAGTATAAG
AATTTCGAAG TCAGGGGTGA AGCCTTCGTC GGACACGTGG CAGCGCTTGA CGGGATTGCG
ATGCTGATCG GTTCGGCAAC AGGAGAGAAA TGA
|
|---|
| Protein sequence | MIPVTTLKDR KVALFGLGGS GLATARALVS GGAEVTAWDD NPDSVAKASA EGIRTEDLHT
IDWSQQALFV LSPGVPLTHP KPHWTVDLAR AAGVDIVGDV ELFVRERRAH APDCPFIAIT
GTNGKSTTTA LIAHILKSAG YDTQLGGNIG TAVLTLDPPK AGRYYVVECS SYQIDLAPTL
NPSAGILLNL TPDHLDRHGT MQHYADVKER LVAGSDVAIV GVDDSHSALI ADRVERADVK
VVRISRRSVV ASGIYAEGSR LIQAAGGAML PFADLDGIQT LRGSHNAQNA AAAVAACLAV
GVSADDIRAG LASFPGLKHR MQPVGQRGRV VFVNDSKATN ADAAAPALSS YDRIYWIAGG
LPKAGGITTL APYFPRIAKA YLIGEAAAEF AATLGEAVPY EISGTLERAV VHAAADAERD
EAAASAVMLS PACASFDQYK NFEVRGEAFV GHVAALDGIA MLIGSATGEK
|
|---|
| |