| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_2487 |
|---|
| Symbol | |
|---|
| ID | 6981229 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011369 |
|---|
| Strand | + |
|---|
| Start bp | 2521261 |
|---|
| End bp | 2522361 |
|---|
| Gene Length | 1101 bp |
|---|
| Protein Length | 366 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 643397202 |
|---|
| Product | branched-chain amino acid aminotransferase |
|---|
| Protein accession | YP_002281987 |
|---|
| Protein GI | 209550070 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
|---|
| TIGRFAM ID | [TIGR01123] branched-chain amino acid aminotransferase, group II |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.151305 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGTGA CGTCTGCCTC TCCTGAAATC AAAATCGAAC TCCACAAGTC TCCCGTCCCG
GACGCCGATC GCATTCAGGC ACTCGAGACG CCCGGCTTCG GCAAGCTCTT CACGGATCAT
ATGGTCCTGG CACGATGGAC TGCCGACAAG GGCTGGCACG ATGCAAAGGT TACGCCCAGG
CGACCCCTGG AACTCGATCC TGCGAGCGCC GTGCTGCACT ATGCTCAGGA AATCTTCGAG
GGCATGAAAG CCTACAAGGC GGACGATGGC CGGATTCTGC TCTTTCGGCC TGAAGAGAAC
GCACGCCGCT TCGCGCAGTC GGCGACCCGC ATGGCGATGC CTCCCGTGCC CGAAGACCTC
TTCCTGAAGG CGGTCGAAGA ACTGGTCCGT GTCGACAAGG CCTGGATTCC CACAGGCGAC
GCCAGCCTGT ACCTTCGCCC CTTCATGTTC GCCAACGAGG CGTTTCTCGG CGTTCGTCCG
GCTCAGGAAT ATGTCTTCTG CATCATCGCC TCTCCGGTCG GCGCCTACTT CAAGGGCGGC
GCAAAGGCGG TTTCCCTTTG GGTCGAGACC GAATACACCC GTGCAGCCGC CGGCGGCACG
GGTGCAGCAA AATGCGGCGG AAACTACGCA GCCAGCCTCG TGGCGCAAGC CGAGGCGACC
AAAAAGGGTT GCGATCAGGT GGTCTTCCTG GACGCCGCAG AGCATCGTTG GGTCGAAGAA
CTCGGCGGCA TGAACGTCTT CTTCGTGATG AACGACGGAT CAGTGGTGAC CCCGCCCCTT
GGCGGCACGA TCCTGCCGGG CATCACCCGG GCTTCCGTGA TCGTGCTCAC CGAAGAAAGG
GGCTTACGCG TCGAGGAGCG CCCCTATTCG TTCGCGGAAT GGCAAGACGA CGCTGCCAGT
GGCAGGCTCG TCGAAGCATT CGCTTGCGGC ACTGCCGCAG TTCTGGCGGG CATCGGCCTG
GTTCGACATG CCGGCGGCGA GTTTCTGGTC GGAGACGGAC AGACCGGCAA GTTGACCAGT
GAACTGCGCC AGCAGCTCGT CAGCCTGCAG AAGGGCGTAA CGAACGATGA GCACGGCTGG
ACGCGCCTCA TCCCGGCCTG A
|
|---|
| Protein sequence | MTVTSASPEI KIELHKSPVP DADRIQALET PGFGKLFTDH MVLARWTADK GWHDAKVTPR
RPLELDPASA VLHYAQEIFE GMKAYKADDG RILLFRPEEN ARRFAQSATR MAMPPVPEDL
FLKAVEELVR VDKAWIPTGD ASLYLRPFMF ANEAFLGVRP AQEYVFCIIA SPVGAYFKGG
AKAVSLWVET EYTRAAAGGT GAAKCGGNYA ASLVAQAEAT KKGCDQVVFL DAAEHRWVEE
LGGMNVFFVM NDGSVVTPPL GGTILPGITR ASVIVLTEER GLRVEERPYS FAEWQDDAAS
GRLVEAFACG TAAVLAGIGL VRHAGGEFLV GDGQTGKLTS ELRQQLVSLQ KGVTNDEHGW
TRLIPA
|
|---|
| |