Gene Rleg2_2301 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_2301 
Symbol 
ID6981040 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011369 
Strand
Start bp2355597 
End bp2357249 
Gene Length1653 bp 
Protein Length550 aa 
Translation table11 
GC content59% 
IMG OID643397014 
Productdiguanylate cyclase/phosphodiesterase 
Protein accessionYP_002281802 
Protein GI209549885 
COG category[T] Signal transduction mechanisms 
COG ID[COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.465662 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGAAAA TTCGTGCGGC CAGCTCGGCC CTCGGACAAA CACAGGCAGA AGCTTCGACT 
TCGATCGACC GGCTTTTGTT CTTTGACCGC GACTTCAATC CCGTCGAGAA CTTGCTCGGC
AATGAGCTGC CTGCATCAGT CAAACCGGCC ACGTCCCTTT GGGAGCATTT TCCACAGCTG
GACAAATCGG CGATTACGCT CGCTTTCCGC TCCTTGGATG ACAGTGCCCA GCCGTTGCGA
ATATCGGGCG ATCTGGGCGG GCCGGGCGCA CACGGGCTGA CGATCTATCG GATCGGCGAG
CTGTTTGCCG TGGTTCGCTC CGATGAGCTT GTTGACGATG AGCGCGCGAC CCTTCTGCAC
CTGGCGACCC ACGATCCGCT GACGGGACTG CCGAACCGAC GCCAGTTCAG CGACGATCTT
GCTGTGCTGC TGCAGGAGAC CGCAGGCTCG GACGAGACCC TGTCTCTGAT GCAGCTCGAC
CTTGACGATT TCAAGCCCGT CAACGACACA CTTGGGCATC CAGCCGGTGA CAAGCTTCTT
CAATTTGCCG CAAGACGTAT TCAAGACTGC CTGACCAGCG ATGATAGAGC CTACCGACTG
GCCGGCGACG AATTCACCGT CATTTCCAGG GGCTCGGGAC ATCCGGCCAA AGCGCATCGG
TTGGCGGAAG CTTTGGTTGC CGCATTCAAA AAGCCTTTCA CGATCGATGG CATCGCGGTG
TTTGTCGGCA CCAGCATCGG CATATCCACC GCTCCTCCGG ATGGAACCAA TCCGGAGCAG
CTGATGAAGG CGTCCGACCT CGCGCTTTAT GCCGCCAAGC AAGACGGGCG CGGCCGGGCA
AAAGCCTACG ATCCGGCAAT GCTTGAATTG CTGGAGCAAC GCGAATTGCT GCGCCGCAGC
CTGCGCATGG CTTTGGATCA ACAGCAATTC TTCGTCGAGT ATCAACCCCT TGCCGAAGGC
AGCCGCATCG TCGGGTTCGA AGCGTTGCTG AGATGGCACC ACCCGCTACT TGGAAAAATT
CCACCGGCGG CATTCATTCC GATGGCCGAG GCCGATGGAA TGATGCCTGA CATCGGCGCA
TGGGTTTTGG AGCAGGCATG CCGCGAAGCG ATGAAGTGGC CTGAGAATTA CATCGTGGCC
GTCAATGTCT CGGCGGCGGA ATTCTTGACG AGCGGCCTGA CGGATCGCAT ATCGCAGACG
CTGGACCTGG TCGGACTTCC GCCCGAGCGT CTGGAGCTTG AGATCACCGA AAGCGTGCTG
CTTGAGCGCA CCGTCAATAA CATCGACACC CTGAATACGC TCAACGTGCT GGGGATAAGG
ATCTCGCTGG ATGATTTCGG GACCGAATAT TCTTCGCTCA GCTATCTCAA GACATTCCCT
TTCGACACGA TCAAAATCGA CAAATACTTC ATCACCGATC TGGAAACCGA TCCGAAAAGC
CAGACGATCG TCCGCTGCGT CGTCAACCTC GCACATGGCC TCGACATGCA GGTGACAGCC
GAAGGGGTCG AGACGCCGGC TCAGGCGGAA TGGCTGCACA GTGTGGGCTG CGACAGGCTT
CAGGGCTATC TGGTGAGCAG GCCGCTTCCG GTCGAGGCGA TCGGCGAATT CATCGACCGG
GCTGAAACAT CGGTGAGCCA CGCGCTGGTA TAG
 
Protein sequence
MRKIRAASSA LGQTQAEAST SIDRLLFFDR DFNPVENLLG NELPASVKPA TSLWEHFPQL 
DKSAITLAFR SLDDSAQPLR ISGDLGGPGA HGLTIYRIGE LFAVVRSDEL VDDERATLLH
LATHDPLTGL PNRRQFSDDL AVLLQETAGS DETLSLMQLD LDDFKPVNDT LGHPAGDKLL
QFAARRIQDC LTSDDRAYRL AGDEFTVISR GSGHPAKAHR LAEALVAAFK KPFTIDGIAV
FVGTSIGIST APPDGTNPEQ LMKASDLALY AAKQDGRGRA KAYDPAMLEL LEQRELLRRS
LRMALDQQQF FVEYQPLAEG SRIVGFEALL RWHHPLLGKI PPAAFIPMAE ADGMMPDIGA
WVLEQACREA MKWPENYIVA VNVSAAEFLT SGLTDRISQT LDLVGLPPER LELEITESVL
LERTVNNIDT LNTLNVLGIR ISLDDFGTEY SSLSYLKTFP FDTIKIDKYF ITDLETDPKS
QTIVRCVVNL AHGLDMQVTA EGVETPAQAE WLHSVGCDRL QGYLVSRPLP VEAIGEFIDR
AETSVSHALV