Gene Rleg2_2180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_2180 
Symbol 
ID6980919 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011369 
Strand
Start bp2233959 
End bp2235269 
Gene Length1311 bp 
Protein Length436 aa 
Translation table11 
GC content66% 
IMG OID643396899 
ProductExtensin family protein 
Protein accessionYP_002281687 
Protein GI209549770 
COG category[S] Function unknown 
COG ID[COG3921] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.915036 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.64676 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGTTTG TTTCCTTTCC TCGGCGATCC CTTTTGCCCC TGCTGCTCTC GGCGGCGCTG 
ACGACCTGTT CGATCAGCGA TGGGCTGGTG CCGCCGGCCA ATGTCGACAG CGGCACCAGG
GTCAGCTCGA TCTCGCCGGC CCGGGCGCCG GCGGCGCGCA TGGCGCCCTC GGTGCGAATG
ACGCCGGTGG AAAGCCAGGC CTCCTATCCC GTTTCCAATG CGCCGGTCGG CAATAGCCAG
GGCTCGGTCG ATTACCTCAA TACGCCGAAC CTTGCCGGCA CCGGCCATGC GGCGCCCTCC
CAGCCCGCGG CGCGCGGGGG GCGCCTGCCG ATGATCGACA GCGATGAGGC GCTGGCGGCG
GGCCAGCCGA GCGGCAATTG GGGCGGCACG CAGAACCTTG CGATCCCTTC CGGTGGCGTC
AATATGGATG ACGAACTTGG AGCAGAGCCG GTCGTCGGGT TGGCGCAGGA ACAACAGCAG
CAGATCGCAG AGGGCAATGC GACCGAGCCC GTCGTTGACG GCATCGGCAC CGATAGCCCT
ACGCAGGTGA ACCAGCCGCT CCGCCAGCCC GCACTGATGC CGCAGCCGGC AGCACAAGCG
CAGATGAGCC GGGCGCCCGC CTGGAACGAC GGCAGCCCTG TCGTGGCGCC GACACGCGTT
CCGGAAGAGG ACGAAAGCGA AGAGGTCGCG ATGCTGCGGC CCAACAATCC GATGATGAGC
GAGCCGGCGG CACCCGTCGA TCCCAGCATC ATGCCGGCCT CCGAGCTTGC CTGCCGGCGC
GAGCTGAAGC GCATGGGCGT GCTCTTCGAC GAGAAGCCGC CGATCTCGAA CGGGCCGGCC
TGCCAGGTGC CCTATCCGGT ATCGCTGAAG GGGCTTTCCG GCAGTATCGG CGTCAAGCCG
GCGGTAACGC TGAACTGTCA GGTGACGCTC GCCTTCGCCA AATGGGTGAA GAACGAGTTG
GCGCCGTCTG CCCGCTACCG CTACTGGAGT GGCATCAGGA CGATCCAGCC GCTCGGCGGC
TATTCCTGCC GCCGCATGAA CAACAGCCGG CAGAGATACA ATCCGATGTC TGAACACGCC
CGCGGCAATG CCATCGACGT CGGCAAGTTC GTGCTGAAGA ACGGTCATGA GATCGACGTG
CGCAAAAAGG GCCTGTTCTC GCTGCGCGAG GGCCGGTTGC TGAAGGCGGT GCGCACCGAC
AGCTGCCGCT ATTTCAACAC CGTGCTCGGC CCCGGCAGCA ACCCGGAACA CTGGAACCAC
TTCCACTTCG ACCTGCGCTC CCGCAAGAGC GGCAAGGTCT ATTGCGACTG A
 
Protein sequence
MAFVSFPRRS LLPLLLSAAL TTCSISDGLV PPANVDSGTR VSSISPARAP AARMAPSVRM 
TPVESQASYP VSNAPVGNSQ GSVDYLNTPN LAGTGHAAPS QPAARGGRLP MIDSDEALAA
GQPSGNWGGT QNLAIPSGGV NMDDELGAEP VVGLAQEQQQ QIAEGNATEP VVDGIGTDSP
TQVNQPLRQP ALMPQPAAQA QMSRAPAWND GSPVVAPTRV PEEDESEEVA MLRPNNPMMS
EPAAPVDPSI MPASELACRR ELKRMGVLFD EKPPISNGPA CQVPYPVSLK GLSGSIGVKP
AVTLNCQVTL AFAKWVKNEL APSARYRYWS GIRTIQPLGG YSCRRMNNSR QRYNPMSEHA
RGNAIDVGKF VLKNGHEIDV RKKGLFSLRE GRLLKAVRTD SCRYFNTVLG PGSNPEHWNH
FHFDLRSRKS GKVYCD