| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_2160 |
|---|
| Symbol | |
|---|
| ID | 6980899 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011369 |
|---|
| Strand | + |
|---|
| Start bp | 2215523 |
|---|
| End bp | 2216221 |
|---|
| Gene Length | 699 bp |
|---|
| Protein Length | 232 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 643396881 |
|---|
| Product | major intrinsic protein |
|---|
| Protein accession | YP_002281669 |
|---|
| Protein GI | 209549752 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0580] Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.606155 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.559342 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCCGT TCGATCTGCA GCGCCGACTG GTCGCAGAGG CCATCGGCAC CGCCATGCTG
GTCGCAACCG TCGTCGGGTC CGGCATCATG GCGACGTCGC TGACCGAGGA TGTCGGGCTT
GCCCTGCTCG GCAACACGCT CGCGACCGGC GCCATGCTGG TAGTGCTGAT CACCGTGCTC
GGGCCGATCT CCGGTGCCCA TTTCAACCCG GCCGTCTCAC TGGTCTTCGC AATGTTGCGT
TCGCTGCCGA AACGCGACCT CACGGGATAT GTGCTGGCAC AGATTGCCGG CGGCGTGGCA
GGGACGATCG CCGCCCACCT GATGTTCGAA CTCCCGCTCG TCGAATTCTC CAGCAAGGTT
CGCACCGGCG GCGCACAATG GTTCTCCGAA GGTGTGGCGA CCTTCGGCCT GGTCGCGGTC
ATTCTCGCCG GCATCCGGTT CGAGCAGAAA GCGGTGCCAT GGCTGGTCGG CCTCTACATC
ACCGCCGCCT ATTGGTTCAC CGCCTCCACC TCGTTCGCCA ACCCGGCCGT TGCGCTCGCC
CGCTCCCTGA CCAACACTTT TTCCGGCATC CGCCCGGTCG ATCTTCCGGG CTTCTGGCTT
GCCGAAATCG CCGGCGCGCT CCTTGCGCTC ATTCTTTTCA CCTGGCTGCT GCAGCCGGCC
GAGACATCGT CAACCCTATC CAGTGAGGCG AAGCTATGA
|
|---|
| Protein sequence | MAPFDLQRRL VAEAIGTAML VATVVGSGIM ATSLTEDVGL ALLGNTLATG AMLVVLITVL
GPISGAHFNP AVSLVFAMLR SLPKRDLTGY VLAQIAGGVA GTIAAHLMFE LPLVEFSSKV
RTGGAQWFSE GVATFGLVAV ILAGIRFEQK AVPWLVGLYI TAAYWFTAST SFANPAVALA
RSLTNTFSGI RPVDLPGFWL AEIAGALLAL ILFTWLLQPA ETSSTLSSEA KL
|
|---|
| |