Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg2_2108 |
Symbol | |
ID | 6980847 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
Kingdom | Bacteria |
Replicon accession | NC_011369 |
Strand | + |
Start bp | 2168879 |
End bp | 2169670 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 643396830 |
Product | transcriptional regulator, AraC family |
Protein accession | YP_002281618 |
Protein GI | 209549701 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0188933 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGCACCGG AAAGACGAAA AGATACCGCG TTGCTCGCTG CCCGTGCCGG CCGCTACCGG GAATATGCGC CGCCGCTGAG GCTGCGACAC CATTTCAGCC GGTTCTGGTC GCATGCGCTC AATGACGGAC CGCCGGCACA GGTGGCGATC GTGCCGGACG GCTATTGCGA CCTCCTCTGG ATCGACGGCC GGCTGGCAGT CGCCGGGCCC GACAGGACGG CGGCCTTTCC CACTCTCCGG CCGGGCACGA CGGTCATCGG CGCACGTTTT GCGCCGGGCG CCGCTGCACC CTGGCTGAAG ACGCCACTCT CGGCCCTGCT CGGCCGCTCG GTGCCGCTTG CCGACATCGG CTGGAAGCAC ACGGCCGAAT TCGAGGCACG GCTTGGCGAT TGCCCCGATC CAGCGGATGC CATGGCGCTA TTCGGCCGCC TGCTCGAAGA GGCCGCGCGC GATGCGGACG AACCCGCTGA GGATGCCGCC ATGATCTTCG CCGCCGCCGA CAGCGGCCGC CCGGCGTCCG GGCTGCTCGA CCGGCTCAGC ATGAGCGAAA GGCAGCTGCG TCGCCGTTGC CACCACCATT TCGGCTATGG CGCCAAGACG CTGGAACGGA TCCGTCGGTT CCAGCGTTTC CTCGACCTCT GCCGCAGGTC GGGCACGATG CCGCTTGCCC ATCTTGCGCT CGAAGCGGGC TTTGCCGACC AAGCTCACAT GACGCGTGAG GTCGGCGAGC TCTCGGGGCT GACTCCTACC GCCATTCTTG GCCAACTCAG CATGCCGAAA AAACCAGGCT GA
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Protein sequence | MAPERRKDTA LLAARAGRYR EYAPPLRLRH HFSRFWSHAL NDGPPAQVAI VPDGYCDLLW IDGRLAVAGP DRTAAFPTLR PGTTVIGARF APGAAAPWLK TPLSALLGRS VPLADIGWKH TAEFEARLGD CPDPADAMAL FGRLLEEAAR DADEPAEDAA MIFAAADSGR PASGLLDRLS MSERQLRRRC HHHFGYGAKT LERIRRFQRF LDLCRRSGTM PLAHLALEAG FADQAHMTRE VGELSGLTPT AILGQLSMPK KPG
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