Gene Rleg2_1981 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_1981 
Symbol 
ID6980720 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011369 
Strand
Start bp2033734 
End bp2034345 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content62% 
IMG OID643396704 
Productputative ABC transporter protein 
Protein accessionYP_002281492 
Protein GI209549575 
COG category[R] General function prediction only 
COG ID[COG3218] ABC-type uncharacterized transport system, auxiliary component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.00566413 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.786267 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCGCAT CGCATCTGTT GTCGCGCCGT TCATGGATCA GGGGAACGGT GATCGCGCTG 
CCGCTGACGG CGCTGATCCT TTCGGGGTGC GGCACCGCGG CCAAGAACGA TACCTATGAT
CTATCCGCTG CCGTTGACGG TGACGGACCC GCGGCCAAAT CTCGCCAGAT CCTGATCGCT
TCGCCAACGG CGCTGAATGC GGTCGGCAGC GAGCAGATCG TCATCCGCGT TTCGCCATCG
GAAATTCAGT ATCTCTCTCG GGCGCAATGG GGCGACAAGC TGCCGCGCAT GGTGCAGTCG
AAGCTGGTCG AAGCCTTCGA GAACTCCGGC AAACTCGGTG GCGTCGGCAT ACCGGGGCAG
GGACTGGCGA TCGACTATCA GGTCGTCACC GATATTCGCT CCTTCGAGAT CGACGCTTCG
AACGGCAACC AGGCGGTGGT CGAAATCTCC GCCAAGATCC TCAACGACCG CAACGGCTCG
GTGCGCGCCC AGAAGGTGTT CCGTGCCGTG GCGCCGGCCG GCGGCGATAA CGCTGGCTTC
GTGAAGGGTC TGGACCGCGC CTTCTCCACG GTTGTCTCCG AGATCGTCAA CTGGACGCTT
CGTTCAATCT GA
 
Protein sequence
MVASHLLSRR SWIRGTVIAL PLTALILSGC GTAAKNDTYD LSAAVDGDGP AAKSRQILIA 
SPTALNAVGS EQIVIRVSPS EIQYLSRAQW GDKLPRMVQS KLVEAFENSG KLGGVGIPGQ
GLAIDYQVVT DIRSFEIDAS NGNQAVVEIS AKILNDRNGS VRAQKVFRAV APAGGDNAGF
VKGLDRAFST VVSEIVNWTL RSI