Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg2_1981 |
Symbol | |
ID | 6980720 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
Kingdom | Bacteria |
Replicon accession | NC_011369 |
Strand | - |
Start bp | 2033734 |
End bp | 2034345 |
Gene Length | 612 bp |
Protein Length | 203 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 643396704 |
Product | putative ABC transporter protein |
Protein accession | YP_002281492 |
Protein GI | 209549575 |
COG category | [R] General function prediction only |
COG ID | [COG3218] ABC-type uncharacterized transport system, auxiliary component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.00566413 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.786267 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCGCAT CGCATCTGTT GTCGCGCCGT TCATGGATCA GGGGAACGGT GATCGCGCTG CCGCTGACGG CGCTGATCCT TTCGGGGTGC GGCACCGCGG CCAAGAACGA TACCTATGAT CTATCCGCTG CCGTTGACGG TGACGGACCC GCGGCCAAAT CTCGCCAGAT CCTGATCGCT TCGCCAACGG CGCTGAATGC GGTCGGCAGC GAGCAGATCG TCATCCGCGT TTCGCCATCG GAAATTCAGT ATCTCTCTCG GGCGCAATGG GGCGACAAGC TGCCGCGCAT GGTGCAGTCG AAGCTGGTCG AAGCCTTCGA GAACTCCGGC AAACTCGGTG GCGTCGGCAT ACCGGGGCAG GGACTGGCGA TCGACTATCA GGTCGTCACC GATATTCGCT CCTTCGAGAT CGACGCTTCG AACGGCAACC AGGCGGTGGT CGAAATCTCC GCCAAGATCC TCAACGACCG CAACGGCTCG GTGCGCGCCC AGAAGGTGTT CCGTGCCGTG GCGCCGGCCG GCGGCGATAA CGCTGGCTTC GTGAAGGGTC TGGACCGCGC CTTCTCCACG GTTGTCTCCG AGATCGTCAA CTGGACGCTT CGTTCAATCT GA
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Protein sequence | MVASHLLSRR SWIRGTVIAL PLTALILSGC GTAAKNDTYD LSAAVDGDGP AAKSRQILIA SPTALNAVGS EQIVIRVSPS EIQYLSRAQW GDKLPRMVQS KLVEAFENSG KLGGVGIPGQ GLAIDYQVVT DIRSFEIDAS NGNQAVVEIS AKILNDRNGS VRAQKVFRAV APAGGDNAGF VKGLDRAFST VVSEIVNWTL RSI
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