Gene Rleg2_1953 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_1953 
Symbol 
ID6980692 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011369 
Strand
Start bp1997668 
End bp1998879 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content60% 
IMG OID643396676 
Productisocitrate dehydrogenase 
Protein accessionYP_002281464 
Protein GI209549547 
COG category[C] Energy production and conversion 
COG ID[COG0538] Isocitrate dehydrogenases 
TIGRFAM ID[TIGR00127] isocitrate dehydrogenase, NADP-dependent, eukaryotic type 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.123809 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.403096 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAAGA TCAAGGTCGC CAATCCCGTC GCCGATCTCG ACGGCGATGA AATGACGCGC 
ATCATTTGGC AGCTCATCAA GGATAAGCTG ATCCATCCGT ATCTCGACCT CGATATCGAC
TATTTCGACC TCTCCGTCGA AAACCGCGAC GCCACCAACG ACCAGGTAAC GGTCGATGCC
GCCAACGCCA TCAAGAAATA CGGCGTCGGC ATCAAGTGCG CGACGATCAC GCCGGACGAA
GCCCGCGTCA AGGAATTCAA CCTCAAGGAA ATGTGGAAGA GCCCGAACGG TACGATCCGC
AACATTCTGG GCGGCGTCAT CTTCCGCGAG CCGATCATTT GCAAAAACGT GCCGCGCCTG
GTTCCCGGCT GGACGCAGCC GATCGTCGTC GGCCGTCACG CCTTCGGCGA CCAGTATCGC
GCAACGGATT TCAAATTCCC CGGCAAGGGC AAGCTGACGA TCAAGTTCGT CGGTGAAGAC
GGCACCGTGA TCGAAAAGGA AGTCTTCAAC GCGCCGGGCG CCGGCGTCGC CATGGCCATG
TACAACCTCG ACGAATCGAT CCGCGAATTC GCCCGCGCCT CGATGATGTA CGGCCTGATG
CGCAAGTGGC CGGTCTACCT GTCGACCAAG AACACCATCC TCAAGGCCTA TGACGGACGC
TTCAAGGATA TCTTCGAAGA AGTCTTCGAG GCCGAATTCA AGGATCAGTT CAAGGACGCC
GGCATCACTT ACGAACATCG TCTGATCGAC GACATGGTCG CCTCGGCGCT CAAGTGGTCG
GGCGGCTACG TCTGGGCCTG CAAGAACTAT GACGGCGACG TCCAGTCCGA CACTGTTGCC
CAGGGCTTCG GCTCGCTCGG TCTGATGACC TCGGTTCTGC TCACGCCGGA TGGCAAGACG
GTCGAAGCCG AAGCCGCTCA CGGCACCGTC ACCCGCCACT ACCGCCAGCA CCAGAAGGGC
CAGGAAACCT CGACGAACTC GATCGCCTCG ATCTTCGCCT GGACCCGCGG CCTCGCTCAC
CGCGCCAAGC TCGACGACAA TGCCGAACTG GCCCGCTTCG CCTCGACGCT CGAAAAGGTC
TGCGTCGATA CCGTCGAATC CGGATTCATG ACCAAGGACT TGGCGCTCTT GATCGGCCCG
GATCAGCCGT GGCTCTCCAC CACCGCCTTC CTCGACAAGA TCGACCAGAA CCTGCAGAAG
GCGATGGCGT AA
 
Protein sequence
MNKIKVANPV ADLDGDEMTR IIWQLIKDKL IHPYLDLDID YFDLSVENRD ATNDQVTVDA 
ANAIKKYGVG IKCATITPDE ARVKEFNLKE MWKSPNGTIR NILGGVIFRE PIICKNVPRL
VPGWTQPIVV GRHAFGDQYR ATDFKFPGKG KLTIKFVGED GTVIEKEVFN APGAGVAMAM
YNLDESIREF ARASMMYGLM RKWPVYLSTK NTILKAYDGR FKDIFEEVFE AEFKDQFKDA
GITYEHRLID DMVASALKWS GGYVWACKNY DGDVQSDTVA QGFGSLGLMT SVLLTPDGKT
VEAEAAHGTV TRHYRQHQKG QETSTNSIAS IFAWTRGLAH RAKLDDNAEL ARFASTLEKV
CVDTVESGFM TKDLALLIGP DQPWLSTTAF LDKIDQNLQK AMA