| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_1940 |
|---|
| Symbol | |
|---|
| ID | 6980679 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011369 |
|---|
| Strand | + |
|---|
| Start bp | 1983737 |
|---|
| End bp | 1984984 |
|---|
| Gene Length | 1248 bp |
|---|
| Protein Length | 415 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 643396663 |
|---|
| Product | drug resistance transporter, Bcr/CflA subfamily |
|---|
| Protein accession | YP_002281451 |
|---|
| Protein GI | 209549534 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | [TIGR00710] drug resistance transporter, Bcr/CflA subfamily
[TIGR00880] Multidrug resistance protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.00164686 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACAGATT CATCACAAGC CGTGTCCGCG GGCCGCCTGC CCATGGGCAA GCGAGAATTT
ATCGCGCTCG CCGCCTTCCT GATGGCCGTC AACTCTCTGG CGATCGACAT CATGCTGCCG
GCGTTGCAGC AGATCGGCGC GAGCCTCGGC GTCGAGAGCG AAAATCATCG CCAGTTCGTC
GTTTCCACCT ATCTGCTCGG CTTCGGTTGT GCGCAGTTGT TCTACGGGCC GCTGTCTGAC
CGCTTCGGCC GCCGCACGCC GCTTTTGATC GGTCTCGTCA TCTACATTCT CTCCGCCATC
AGTATCGTCT TCGTCCCCAC CTTCGCAGGC TTGCTTGCCC TGCGCTTTGT CCAGGGCATC
GGTTCGGCGG CAACCCGCGT CATCACCGTC TCCATTGTCC GCGACATCTA TGGCGGCAGG
CAGATGGCCG AAGTCATGTC GCTGATCATG ATGGTCTTCA TGATCGTGCC GGTGATTGCA
CCAGGCACCG GCCAGATCGT GATGTTCTTC GGCAACTGGC ACCTGATCTT CCTTTTCATC
GCCGCCATGG CGATTGCAAT CGCCGTCTGG GCTTACATCC GCCTGCCGGA AACCCTGCAT
CCACAGAATG TCCGCCCCTT CACCGCCCGC TCGATCTTCG GCGCCTTCAA GCTGGTGCTG
ACCAATCGCA TCGCGCTTTG CTATACCATC GCCAGCACCT TCATCTTCGG CGCGCTGTTC
GGCTTCATCA ATTCGGCCCA GCAGGTCTAT GTCGGCATTT ACGATCTCGG CGTCTATTTC
CCCTTCGCCT TTGCCGGCGT GGCGATCTTC ATGTCGCTGT CGTCGTTTTT CAACTCACGC
TTCGTCGGCA AACTCGGCAT GCGTCGCCTG TCGCACGGCT CGCTCATCGG TTTCATCACC
ATCAACACCA TCTGGCTGAT CGTCCAGATG GCGAGTTCCG AGCCGATGCC TTTCGCTCTG
TTCATCTCCT TCTTCGGCCT CGCCATGTTC CAGTTCGGCT GGATCGGCTC GAACTTCAAT
TCGCTCGCCA TGGAGCCGCT CGGTCATGTC GCCGGCACCG CCTCCTCCGT CCTCGGCTTC
ATGAGCACGG TCGGCGGCGC CCTCATCGGC GCCGGCATCG GCCAGGCTTT CGACGGCACT
GCGCTGCCGA TGGTCGCCGG TTATTTCATC GTGTCGATCA TCGGGCTGAT CTTCGTGCTG
ATCGCCGAAA AGGGCCGCCT CTTCCAACAG CAGAACCCGG CCGTCTGA
|
|---|
| Protein sequence | MTDSSQAVSA GRLPMGKREF IALAAFLMAV NSLAIDIMLP ALQQIGASLG VESENHRQFV
VSTYLLGFGC AQLFYGPLSD RFGRRTPLLI GLVIYILSAI SIVFVPTFAG LLALRFVQGI
GSAATRVITV SIVRDIYGGR QMAEVMSLIM MVFMIVPVIA PGTGQIVMFF GNWHLIFLFI
AAMAIAIAVW AYIRLPETLH PQNVRPFTAR SIFGAFKLVL TNRIALCYTI ASTFIFGALF
GFINSAQQVY VGIYDLGVYF PFAFAGVAIF MSLSSFFNSR FVGKLGMRRL SHGSLIGFIT
INTIWLIVQM ASSEPMPFAL FISFFGLAMF QFGWIGSNFN SLAMEPLGHV AGTASSVLGF
MSTVGGALIG AGIGQAFDGT ALPMVAGYFI VSIIGLIFVL IAEKGRLFQQ QNPAV
|
|---|
| |