Gene Rleg2_1892 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_1892 
Symbol 
ID6980631 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011369 
Strand
Start bp1937500 
End bp1938537 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content63% 
IMG OID643396615 
Productglycoside hydrolase family 25 
Protein accessionYP_002281403 
Protein GI209549486 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3757] Lyzozyme M1 (1,4-beta-N-acetylmuramidase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.101469 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.00660268 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGTCCAT CGGCTTTGCC AGCAATCCTC CTTGCCGCCC TGATCCTGTC GGGATGCGCC 
GCCAGTTCCG GCGCCGAAGA TGTGCTGGGC AACGTGCCGT CGCCGGAGAC GACCAATGCG
ATCACCAAAC CGAACGGCCC GATTCCGGCC GCCGCCGTTG GCGACACGGC ACAGACAAGC
GCGCCGCAGG AAGCGTTGAG CTGGACCGGG CCGGTTCCCG AACCTGAGGC GCTCGTGCCC
GCGGACAGGC CGGTCGGCAT GCCGATGCCG ACGGAAAGAC CGGTGGCGAT GCTGATGCCC
GCCAACCCGG ACGCCGATCC CGATGCCGGC AGGAAATCGC CGTCACGCGG ACAGATCTAC
GGTCACCGAT TCCGCGACGC CAAGCCGATC AATTTTGGTT CCACCTCGCC GAGAAAGCTT
GCCGTGCACG GCGTCGACGT ATCGCGCTGG CAGGGCGAAA TCGACTGGGA GACGTTGAGG
AAGCAAGGCG CGAACTTCGT CTACATCAAA GCGACGGACG GCGGCGATCA CCTCGATCCG
ATGTTCAAGA AGAACTGGCG CCGGGCCAAG GAAGCCGGCC TGAAACACGG CGCCTATCAC
TTCTTCTACT GGTGCCGGAC GGCCGGCGAA CAGGCAGACT GGTTCATCCG CAACGTACCG
AGGGAAGCAA ACGCGCTTCC GCCCGTCATC GACGTCGAAT GGAATGGCGA ATCGAGCTGC
AAGCGGCGCA TTTCCCCCGC CCGCGTCCGG GAAAAGATGC AGGTCTTCAT GGACAAGCTG
GAGCGCTACT ACGGTCAGCG CCCGATCATC TACACCGCGC CGGATTTCTA CCGCGACAAT
TTGAAGGGCC AGATGCTCGA CTATCCCTTC TGGCTGCGCT CGGTCGCCGC CCACCCCTCC
AAGGTCTATC CGGGCCGCAA ATGGCTCTTC TGGCAATATT CCGGCTCCGG CCTTTCCGAA
GGTGTCGAAG GCAAGATCGA TCTCAACGTC TTCAACGGCA ATGAAAGCGA TTGGCACGAC
TGGGTGGCGT CGCGATAG
 
Protein sequence
MRPSALPAIL LAALILSGCA ASSGAEDVLG NVPSPETTNA ITKPNGPIPA AAVGDTAQTS 
APQEALSWTG PVPEPEALVP ADRPVGMPMP TERPVAMLMP ANPDADPDAG RKSPSRGQIY
GHRFRDAKPI NFGSTSPRKL AVHGVDVSRW QGEIDWETLR KQGANFVYIK ATDGGDHLDP
MFKKNWRRAK EAGLKHGAYH FFYWCRTAGE QADWFIRNVP REANALPPVI DVEWNGESSC
KRRISPARVR EKMQVFMDKL ERYYGQRPII YTAPDFYRDN LKGQMLDYPF WLRSVAAHPS
KVYPGRKWLF WQYSGSGLSE GVEGKIDLNV FNGNESDWHD WVASR