| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_1788 |
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| Symbol | |
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| ID | 6980525 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011369 |
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| Strand | - |
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| Start bp | 1833031 |
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| End bp | 1835313 |
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| Gene Length | 2283 bp |
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| Protein Length | 760 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643396509 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_002281299 |
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| Protein GI | 209549382 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0914788 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.266006 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCCATCC GCGCCGGCAA CCTGATGAAG TTTCGAAGAA ATCCAAAGAT AGTACGTGGC
CTCGCTGCCT CCGCAGCCAG CCACGCAACC GCATTTGCTC CGGCACTATT TGCGGCAATT
ATTGCAGTCA TTGTCGTCTG GGTCGCAACG AACTGGCGGC TGGAGCGATC GCTGGCCGAG
GAACGTTCGA TTGTTGCGGG CGAGCTTGCC ACAATATCAT CTCGGCTTCA GACGAACCTC
AATAGCAATG TGAAGCTGCT GCAAGGGCTG GCGGCTGGCA TCGCAGTCGA CCCGGCAATG
GGCCAAGACG GATTTTCCAA GCTTGCCGCG CAGATCCTGC AGCCTGATTC ACAATTGCGC
AGTTTCGCTG CGGCGCCCGA CATGGTGGTC CAGTGGGTTT ACCCGGAAAA AGGAAACGAA
AAGGCCATTG GGCTCGACTA CCGAAAGAAT GATAAGCAAC GGGCTGCGGC GATGCTGGCG
CGCAACACCC ACAATATCGT TCTGACAGGG CCGGTGGAAC TCGTCCAAGG CGGAACCGCT
TTCGTCGTCA GGTGTCCGAT TTATATGAAT GACGGAAAGA GCCAGATCTT TTGGGGTCTG
CTCTCCGGAA TTGTAGACAT TCCAAGGCTT TATGGCGATA GCGGCCTTGG ATCGACCGAA
CTAGAGGTTG CCATCAGCAC GGTGCCGGAG CCAAATTCGC CGAAACAGGT TTTTCTCGGA
AATCTGGAAA CTTTTTCGAA GCAGCCGGTC GTGACATCGG TTGACATGGC TTATGGCCGA
TGGACTTTCG GTGCGGTGCC CAAGAACGGA TGGGGCCAAA ATAACGGGAT CGGCATTTTT
GAGTTTTATG CAAGCCTGTT GGCCCTCTGT GTCGTTGCGC CGATCATTTG GATCGGCTTC
CTGACCAAAT CACGCCAAAG AACGATCGAG AAGCTTCGCC TTCACAAGAA GAAGCTCGTT
CGAGCGCGGC AACGGCTGGA ATATCTGTCG TTGCACGACG CCCTGACGGG GCTGGCGAAC
CGACGGTTCG TCGACCAGAT GATCTCGCAA CCACGGAGAC CCGATGGCGA AGACTGTCTG
ATCCTCATTC ATATCGACCT CGACCGATTT AAAGAGATCA ACGATACCAA AGGGCATGCC
GGCGGTGACA TGGTCCTGCA AACAACCGCT TCGCGCCTCG CCGATTTGAC CGGCCCAACC
GACGTCGCGG CTCGGATCGG CGGGGACGAG TTCATCTTCG CCAGATGGAG CGCCAATCCC
GAGCCTGAAG CAGCCGAATT GGCCAAACAG ATCGTCGACG CGCTCCAGCA ACCCATTCTT
ATCGACGGGG CGGAGTATGT GGTCGGAGCA AGCGTCGGCG TTGCCTGGGA GACTGAACCT
GCCTCCGGGC GGGATCTCGG TCAGTTGCTT CTCAATGCCG ATTTGGCTCT ATACGAAGCG
AAGAAGGCGG GCCGCGGCCG CGCGGCCATT TTCACCGAAG AGCTTCGCAG CGCCGCAATC
CATTCAAAAG AATTGGCAGA TGAGTTCAAT CAGGCGCTCG ACCGCGATGA GCTCGTTGCA
TTCTTCCAGC CGCAATTCCA TGCAGATACG TTGGCTATAT CAGGCGTCGA GGCCCTCGCC
CGCTGGGATC ACCCGCGAAA AGGTCTGCTC GGCCCGAACA ATTTTCTCGA CGCAGCGGAA
AGGCTGGGGC GTAGCGGCGA CATGGATAGG CTGATCCTGC ACAAGGCCCT GTTCGAGCTG
ACGAGATGGG ACAGCCTGGG AATGCAGATC CCGCGTGTCT CCGTCAATAT ATCGGCGCGC
CGACTGGCGC AGGCAAATCT GCTCGCCGAA CTGTCCGGGC TTCCCGCAGC GAGGGGTCGC
CTCTGTTTCG AGCTGCTCGA GACAATTTCC TTCGACGAGC TTCAGCCTGC CCTCAACGAG
GTCATTCCGG CAATCAAAGC GCTCGGCATT GAAATCGAGA TCGACGATTT CGGCACGGAA
CATGCCAGCA TCATCAGTCT GCTTCGATTT GAGCCGCGAC GACTTAAGAT CGACCGCGAA
ATTATCAAGC CGATCATAGC CTCGCCATCA CAACGCCGCC TGGTTTCCTC CATTATCGAA
ATTGGCCGGT CACAGAATAT CGACATTGTC GCCGAGGGCG TGGAGACAAT GGAGCACGCG
AAGATCCTGA AAGATCTCGG TTGCCATTTG CTGCAAGGCT ACGCTCTGGC GCGGCCAATG
ACGTCGGAGC AGTTGATCGA ATTTTGCCGC ACGAAGGACA AAGGACTGAC GCAGGCAGGC
TGA
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| Protein sequence | MSIRAGNLMK FRRNPKIVRG LAASAASHAT AFAPALFAAI IAVIVVWVAT NWRLERSLAE
ERSIVAGELA TISSRLQTNL NSNVKLLQGL AAGIAVDPAM GQDGFSKLAA QILQPDSQLR
SFAAAPDMVV QWVYPEKGNE KAIGLDYRKN DKQRAAAMLA RNTHNIVLTG PVELVQGGTA
FVVRCPIYMN DGKSQIFWGL LSGIVDIPRL YGDSGLGSTE LEVAISTVPE PNSPKQVFLG
NLETFSKQPV VTSVDMAYGR WTFGAVPKNG WGQNNGIGIF EFYASLLALC VVAPIIWIGF
LTKSRQRTIE KLRLHKKKLV RARQRLEYLS LHDALTGLAN RRFVDQMISQ PRRPDGEDCL
ILIHIDLDRF KEINDTKGHA GGDMVLQTTA SRLADLTGPT DVAARIGGDE FIFARWSANP
EPEAAELAKQ IVDALQQPIL IDGAEYVVGA SVGVAWETEP ASGRDLGQLL LNADLALYEA
KKAGRGRAAI FTEELRSAAI HSKELADEFN QALDRDELVA FFQPQFHADT LAISGVEALA
RWDHPRKGLL GPNNFLDAAE RLGRSGDMDR LILHKALFEL TRWDSLGMQI PRVSVNISAR
RLAQANLLAE LSGLPAARGR LCFELLETIS FDELQPALNE VIPAIKALGI EIEIDDFGTE
HASIISLLRF EPRRLKIDRE IIKPIIASPS QRRLVSSIIE IGRSQNIDIV AEGVETMEHA
KILKDLGCHL LQGYALARPM TSEQLIEFCR TKDKGLTQAG
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